Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   I6J38_RS06510 Genome accession   NZ_CP069558
Coordinates   1317685..1318011 (-) Length   108 a.a.
NCBI ID   WP_020998066.1    Uniprot ID   A0A380L7J0
Organism   Streptococcus constellatus strain FDAARGOS_1208     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1312685..1323011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J38_RS06495 (I6J38_06495) glmS 1313196..1315010 (-) 1815 WP_020998064.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -
  I6J38_RS06500 (I6J38_06500) - 1315401..1316600 (-) 1200 WP_006267970.1 acetate kinase -
  I6J38_RS06505 (I6J38_06505) comGH 1316647..1317600 (-) 954 WP_020998065.1 class I SAM-dependent methyltransferase Machinery gene
  I6J38_RS06510 (I6J38_06510) comGG/cglG 1317685..1318011 (-) 327 WP_020998066.1 competence type IV pilus minor pilin ComGG Machinery gene
  I6J38_RS06515 (I6J38_06515) comGF/cglF 1317992..1318429 (-) 438 WP_003035329.1 competence type IV pilus minor pilin ComGF Machinery gene
  I6J38_RS06520 (I6J38_06520) comGE/cglE 1318413..1318706 (-) 294 WP_003035318.1 competence type IV pilus minor pilin ComGE Machinery gene
  I6J38_RS06525 (I6J38_06525) comGD 1318678..1319106 (-) 429 WP_020999411.1 competence type IV pilus minor pilin ComGD Machinery gene
  I6J38_RS06530 (I6J38_06530) comGC 1319066..1319383 (-) 318 WP_020998068.1 competence type IV pilus major pilin ComGC Machinery gene
  I6J38_RS06535 (I6J38_06535) comGB 1319380..1320402 (-) 1023 WP_037592679.1 competence type IV pilus assembly protein ComGB Machinery gene
  I6J38_RS06540 (I6J38_06540) comGA 1320344..1321285 (-) 942 WP_006268058.1 competence type IV pilus ATPase ComGA Machinery gene
  I6J38_RS06545 (I6J38_06545) - 1321355..1321720 (-) 366 WP_022525692.1 DUF1033 family protein -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12949.81 Da        Isoelectric Point: 10.1935

>NTDB_id=468155 I6J38_RS06510 WP_020998066.1 1317685..1318011(-) (comGG/cglG) [Streptococcus constellatus strain FDAARGOS_1208]
MWKQRVKAGIMLYALFITAVFSLLLQFYLHRQTANHRNFTLNRERIQAYAMAAVANENPKQRNFEQGYVQDQKDEKEFIL
TVTMKTGRRYQFRFPLMHSNQTNDNLDE

Nucleotide


Download         Length: 327 bp        

>NTDB_id=468155 I6J38_RS06510 WP_020998066.1 1317685..1318011(-) (comGG/cglG) [Streptococcus constellatus strain FDAARGOS_1208]
GTGTGGAAACAAAGAGTTAAAGCAGGTATTATGCTCTATGCCCTTTTTATAACAGCTGTCTTTAGCTTACTTTTGCAATT
TTACCTTCATCGGCAAACTGCAAATCACAGGAATTTCACCCTAAACCGAGAGCGAATACAGGCTTATGCAATGGCAGCTG
TAGCAAATGAAAATCCTAAACAAAGGAATTTTGAACAGGGGTATGTGCAAGATCAGAAAGATGAGAAAGAGTTCATCCTG
ACAGTAACAATGAAGACGGGTCGCCGTTATCAATTTCGCTTCCCACTTATGCATTCCAATCAAACCAATGACAATTTAGA
CGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380L7J0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus pneumoniae Rx1

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae D39

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae R6

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae TIGR4

43

92.593

0.398
  comGG/cglG Streptococcus mitis NCTC 12261

42.424

91.667

0.389
  comGG/cglG Streptococcus mitis SK321

41.414

91.667

0.38