Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SAI4T8_RS09130 Genome accession   NC_020533
Coordinates   1867744..1868484 (-) Length   246 a.a.
NCBI ID   WP_000216871.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus ST228     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1862744..1873484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAI4T8_RS09105 (SAI4T8_1013550) hemH 1863620..1864543 (-) 924 WP_000162881.1 ferrochelatase -
  SAI4T8_RS09110 (SAI4T8_1013560) hemE 1864601..1865638 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  SAI4T8_RS09115 - 1865628..1865738 (-) 111 WP_001790154.1 hypothetical protein -
  SAI4T8_RS09120 (SAI4T8_1013570) traP 1865901..1866404 (+) 504 WP_000737976.1 signal transduction protein TRAP -
  SAI4T8_RS09125 (SAI4T8_1013580) - 1866528..1867751 (-) 1224 WP_000551836.1 ABC transporter permease -
  SAI4T8_RS09130 (SAI4T8_1013590) pptA 1867744..1868484 (-) 741 WP_000216871.1 ABC transporter ATP-binding protein Regulator
  SAI4T8_RS09135 - 1868618..1869040 (+) 423 WP_000004981.1 HIT family protein -
  SAI4T8_RS09140 - 1869182..1869547 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  SAI4T8_RS09145 (SAI4T8_1013600) - 1870282..1870839 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  SAI4T8_RS09150 (SAI4T8_1013610) - 1871044..1872006 (+) 963 WP_000782121.1 foldase protein PrsA -
  SAI4T8_RS09155 (SAI4T8_1013620) yhaM 1872127..1873068 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27699.07 Da        Isoelectric Point: 4.6672

>NTDB_id=46798 SAI4T8_RS09130 WP_000216871.1 1867744..1868484(-) (pptA) [Staphylococcus aureus subsp. aureus ST228]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRIVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=46798 SAI4T8_RS09130 WP_000216871.1 1867744..1868484(-) (pptA) [Staphylococcus aureus subsp. aureus ST228]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCATATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACATATAGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGACTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAATCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment