Detailed information
Bioinformatically predicted
Overview
| Name | luxO | Type | Regulator |
| Locus tag | I6J98_RS00185 | Genome accession | NZ_CP069501 |
| Coordinates | 38003..39412 (-) | Length | 469 a.a. |
| NCBI ID | WP_001188777.1 | Uniprot ID | Q32A39 |
| Organism | Escherichia coli strain FDAARGOS_1268 | ||
| Function | promote HapR production (predicted from homology) Competence regulation |
||
Genomic Context
Location: 33003..44412
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J98_RS00165 (I6J98_00165) | yihA | 34306..34938 (-) | 633 | WP_000183349.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| I6J98_RS23955 | - | 35235..35401 (+) | 167 | Protein_28 | hypothetical protein | - |
| I6J98_RS00170 (I6J98_00170) | yihI | 35520..36029 (+) | 510 | WP_001572146.1 | Der GTPase-activating protein YihI | - |
| I6J98_RS00175 (I6J98_00175) | hemN | 36218..37591 (+) | 1374 | WP_000116109.1 | oxygen-independent coproporphyrinogen III oxidase | - |
| I6J98_RS00180 (I6J98_00180) | yshB | 37781..37891 (-) | 111 | WP_000893994.1 | YshB family small membrane protein | - |
| I6J98_RS00185 (I6J98_00185) | luxO | 38003..39412 (-) | 1410 | WP_001188777.1 | nitrogen regulation protein NR(I) | Regulator |
| I6J98_RS00190 (I6J98_00190) | glnL | 39424..40473 (-) | 1050 | WP_000190577.1 | nitrogen regulation protein NR(II) | - |
| I6J98_RS00195 (I6J98_00195) | glnA | 40647..42056 (-) | 1410 | WP_001271717.1 | glutamate--ammonia ligase | - |
| I6J98_RS00200 (I6J98_00200) | typA | 42429..44252 (+) | 1824 | WP_000570668.1 | ribosome-dependent GTPase TypA | - |
Sequence
Protein
Download Length: 469 a.a. Molecular weight: 52254.74 Da Isoelectric Point: 6.4561
>NTDB_id=467571 I6J98_RS00185 WP_001188777.1 38003..39412(-) (luxO) [Escherichia coli strain FDAARGOS_1268]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME
Nucleotide
Download Length: 1410 bp
>NTDB_id=467571 I6J98_RS00185 WP_001188777.1 38003..39412(-) (luxO) [Escherichia coli strain FDAARGOS_1268]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGGGCAGG
TTTAACCTGTACGACGTTTGAGAACGGCGCAGAAGTGCTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTTGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCCGTGGCGCTGGTTGAGCGCGCCATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
AGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGTCACGAGA
AAGGCGCGTTTACCGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCTGATGGCGGTACATTATTCCTCGATGAA
ATTGGCGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTTGAACAGCGGGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCACTGCGTGAGCGTCGGGAAGATATTCCCCGT
CTGGCACGCCATTTTTTACAGGTTGCCGCGCGAGAGCTGGGCGTAGAAGCGAAGTTGCTGCATCCGGAAACCGAAGCCGC
GCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGTCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGTGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGTTGGGCGACACTTTTAGCGCAGTGGGCAGATCGGGCGCTACGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
TGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCAGCGCGGCTACTTGGCT
GGGGCCGTAACACCCTGACGCGTAAGTTAAAAGAGCTGGGAATGGAGTGA
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGGGCAGG
TTTAACCTGTACGACGTTTGAGAACGGCGCAGAAGTGCTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTTGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCCGTGGCGCTGGTTGAGCGCGCCATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
AGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGTCACGAGA
AAGGCGCGTTTACCGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCTGATGGCGGTACATTATTCCTCGATGAA
ATTGGCGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTTGAACAGCGGGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCACTGCGTGAGCGTCGGGAAGATATTCCCCGT
CTGGCACGCCATTTTTTACAGGTTGCCGCGCGAGAGCTGGGCGTAGAAGCGAAGTTGCTGCATCCGGAAACCGAAGCCGC
GCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGTCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGTGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGTTGGGCGACACTTTTAGCGCAGTGGGCAGATCGGGCGCTACGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
TGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCAGCGCGGCTACTTGGCT
GGGGCCGTAACACCCTGACGCGTAAGTTAAAAGAGCTGGGAATGGAGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxO | Vibrio cholerae strain A1552 |
39.871 |
98.934 |
0.394 |
| pilR | Pseudomonas aeruginosa PAK |
39.066 |
100 |
0.392 |