Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   H0242_RS06050 Genome accession   NZ_CP059148
Coordinates   1155151..1155327 (+) Length   58 a.a.
NCBI ID   WP_001003335.1    Uniprot ID   A0A9W5VN58
Organism   Bacillus thuringiensis serovar sumiyoshiensis strain 4AO1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150151..1160327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0242_RS06030 (H0242_05975) clpC 1150482..1153082 (+) 2601 WP_000365378.1 ATP-dependent chaperone ClpB Regulator
  H0242_RS06035 (H0242_05980) - 1153121..1153303 (-) 183 WP_001211116.1 YjzD family protein -
  H0242_RS06040 (H0242_05985) - 1153460..1154194 (+) 735 WP_000028706.1 hypothetical protein -
  H0242_RS06045 (H0242_05990) - 1154224..1155096 (+) 873 WP_061666480.1 NAD-dependent epimerase/dehydratase family protein -
  H0242_RS06050 (H0242_05995) comZ 1155151..1155327 (+) 177 WP_001003335.1 ComZ family protein Regulator
  H0242_RS06055 (H0242_06000) fabH 1155559..1156491 (+) 933 WP_001100531.1 beta-ketoacyl-ACP synthase III -
  H0242_RS06060 (H0242_06005) fabF 1156523..1157761 (+) 1239 WP_086405979.1 beta-ketoacyl-ACP synthase II -
  H0242_RS06065 (H0242_06010) - 1157869..1158657 (+) 789 WP_000538198.1 DUF2268 domain-containing protein -
  H0242_RS06070 (H0242_06015) - 1158802..1159548 (+) 747 WP_000966118.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6575.71 Da        Isoelectric Point: 4.4184

>NTDB_id=467359 H0242_RS06050 WP_001003335.1 1155151..1155327(+) (comZ) [Bacillus thuringiensis serovar sumiyoshiensis strain 4AO1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQQ

Nucleotide


Download         Length: 177 bp        

>NTDB_id=467359 H0242_RS06050 WP_001003335.1 1155151..1155327(+) (comZ) [Bacillus thuringiensis serovar sumiyoshiensis strain 4AO1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAACAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586