Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | H0242_RS00530 | Genome accession | NZ_CP059148 |
| Coordinates | 96605..99040 (+) | Length | 811 a.a. |
| NCBI ID | WP_000971173.1 | Uniprot ID | A0A9X6WNG6 |
| Organism | Bacillus thuringiensis serovar sumiyoshiensis strain 4AO1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 91605..104040
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0242_RS00515 (H0242_00515) | ctsR | 94333..94794 (+) | 462 | WP_001244560.1 | transcriptional regulator CtsR | - |
| H0242_RS00520 (H0242_00520) | - | 94965..95513 (+) | 549 | WP_000128386.1 | UvrB/UvrC motif-containing protein | - |
| H0242_RS00525 (H0242_00525) | - | 95518..96582 (+) | 1065 | WP_000050834.1 | protein arginine kinase | - |
| H0242_RS00530 (H0242_00530) | clpC | 96605..99040 (+) | 2436 | WP_000971173.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| H0242_RS00535 (H0242_00535) | radA | 99136..100512 (+) | 1377 | WP_001085199.1 | DNA repair protein RadA | Machinery gene |
| H0242_RS00540 (H0242_00540) | disA | 100516..101589 (+) | 1074 | WP_000392164.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| H0242_RS00545 (H0242_00545) | - | 101751..102854 (+) | 1104 | WP_000919681.1 | PIN/TRAM domain-containing protein | - |
| H0242_RS00550 (H0242_00550) | ispD | 102871..103551 (+) | 681 | WP_000288311.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90554.45 Da Isoelectric Point: 6.4057
>NTDB_id=467349 H0242_RS00530 WP_000971173.1 96605..99040(+) (clpC) [Bacillus thuringiensis serovar sumiyoshiensis strain 4AO1]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSATNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSATNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=467349 H0242_RS00530 WP_000971173.1 96605..99040(+) (clpC) [Bacillus thuringiensis serovar sumiyoshiensis strain 4AO1]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTGTTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCATTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGGCGAGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAGGTTATTGAATTATCTATGGATGAAGCGCGTAAGCTAGGCCATTCTTACGTTGGAACAGAACA
CATTTTACTCGGTTTAATCCGTGAAGGTGAAGGTGTAGCCGCACGTGTTTTAAATAATTTAGGTGTAAGTCTAAATAAAG
CAAGACAACAAGTGTTACAACTTCTTGGAAGTAATGAAGCTAGTTCAGGTCATCAAGGTGGTTCAGCAACAAATGCAAAT
ACACCGACACTTGACAGTTTAGCAAGGGACTTAACAGTTGTTGCACGTGAAAATCGCTTAGACCCTGTTATTGGACGCGG
TAAAGAAATTCAACGTGTAATTGAGGTATTAAGCCGTAGAACGAAAAATAACCCAGTATTAATTGGTGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGTACAGTGGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTAAAGAAAGTGATGGA
TGAAATTCGCCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCGAATATTTTAAAACCATCTTTAGCACGAGGAGAGCTACAATGTATTGGGGCAACAACTTTAGATGAG
TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTTCAACCAATTCATGTTGATGAGCCAAGTTTAGAAGA
ATCGATTCAAATCTTGAAAGGTTTACGTGATCGTTATGAGGCGCATCACCGTGTATCTATTACAGATGACGCTATTGATG
CAGCTGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTACCGGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAAGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAGATTCGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAGGCTGCATCCTTACGTGATATGGAGCAACGCTTACGTGAGAAGT
TAGAAGATACAAAACGTCAATGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACGCGTATCCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAATTTAGAATCCATTCT
TCATGATCGTTTGATTGGTCAAGATGAAGCAGTAGTAGCTGTAGCAAAAGCTGTTCGTCGTGCAAGAGCAGGATTAAAAG
ATCCGAAGCGCCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAACTTGCAAGAGCACTAGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCAGAGTACATGGAGAAGCATTCTACTTCCCGTTT
AGTTGGTTCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGCAAGCCATATTCAG
TTGTATTATTAGATGAGGTAGAGAAAGCTCATCCGGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGTCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAACGTTGGTGCCGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAATGTCCAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGT
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACTCTTATGGTAAATCAGTTAGTAAATCGCTTAAAAGAACAAGAAATCGAATTGCACTTAACGGAAGG
GGCAATTTCAGCTATTGCTGATAAAGGATTTGATCGTGAATACGGTGCTCGTCCACTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCAGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTGTTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCATTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGGCGAGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAGGTTATTGAATTATCTATGGATGAAGCGCGTAAGCTAGGCCATTCTTACGTTGGAACAGAACA
CATTTTACTCGGTTTAATCCGTGAAGGTGAAGGTGTAGCCGCACGTGTTTTAAATAATTTAGGTGTAAGTCTAAATAAAG
CAAGACAACAAGTGTTACAACTTCTTGGAAGTAATGAAGCTAGTTCAGGTCATCAAGGTGGTTCAGCAACAAATGCAAAT
ACACCGACACTTGACAGTTTAGCAAGGGACTTAACAGTTGTTGCACGTGAAAATCGCTTAGACCCTGTTATTGGACGCGG
TAAAGAAATTCAACGTGTAATTGAGGTATTAAGCCGTAGAACGAAAAATAACCCAGTATTAATTGGTGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGTACAGTGGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTAAAGAAAGTGATGGA
TGAAATTCGCCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCGAATATTTTAAAACCATCTTTAGCACGAGGAGAGCTACAATGTATTGGGGCAACAACTTTAGATGAG
TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTTCAACCAATTCATGTTGATGAGCCAAGTTTAGAAGA
ATCGATTCAAATCTTGAAAGGTTTACGTGATCGTTATGAGGCGCATCACCGTGTATCTATTACAGATGACGCTATTGATG
CAGCTGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTACCGGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAAGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAGATTCGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAGGCTGCATCCTTACGTGATATGGAGCAACGCTTACGTGAGAAGT
TAGAAGATACAAAACGTCAATGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACGCGTATCCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAATTTAGAATCCATTCT
TCATGATCGTTTGATTGGTCAAGATGAAGCAGTAGTAGCTGTAGCAAAAGCTGTTCGTCGTGCAAGAGCAGGATTAAAAG
ATCCGAAGCGCCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAACTTGCAAGAGCACTAGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCAGAGTACATGGAGAAGCATTCTACTTCCCGTTT
AGTTGGTTCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGCAAGCCATATTCAG
TTGTATTATTAGATGAGGTAGAGAAAGCTCATCCGGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGTCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAACGTTGGTGCCGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAATGTCCAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGT
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACTCTTATGGTAAATCAGTTAGTAAATCGCTTAAAAGAACAAGAAATCGAATTGCACTTAACGGAAGG
GGCAATTTCAGCTATTGCTGATAAAGGATTTGATCGTGAATACGGTGCTCGTCCACTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCAGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.802 |
99.877 |
0.857 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
46.209 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.718 |
100 |
0.467 |
| clpC | Streptococcus mutans UA159 |
44.881 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.55 |
98.274 |
0.457 |
| clpC | Streptococcus pneumoniae Rx1 |
46.55 |
98.274 |
0.457 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.25 |
98.644 |
0.456 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.55 |
79.778 |
0.419 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.98 |
84.587 |
0.414 |