Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   H0S58_RS03490 Genome accession   NZ_CP059079
Coordinates   755723..760090 (+) Length   1455 a.a.
NCBI ID   WP_195727156.1    Uniprot ID   -
Organism   Acinetobacter sp. TTH0-4 strain 1BD1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 750723..765090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0S58_RS03465 (H0S58_03465) - 751197..751838 (-) 642 WP_195727154.1 hypothetical protein -
  H0S58_RS03470 (H0S58_03470) pilG 752115..752498 (+) 384 WP_092717291.1 twitching motility response regulator PilG Regulator
  H0S58_RS03475 (H0S58_03475) - 752522..752890 (+) 369 WP_053578506.1 response regulator -
  H0S58_RS03480 (H0S58_03480) - 752897..753433 (+) 537 WP_053578505.1 chemotaxis protein CheW -
  H0S58_RS03485 (H0S58_03485) - 753476..755548 (+) 2073 WP_195727155.1 methyl-accepting chemotaxis protein -
  H0S58_RS03490 (H0S58_03490) chpA 755723..760090 (+) 4368 WP_195727156.1 Hpt domain-containing protein Regulator
  H0S58_RS03495 (H0S58_03495) - 760095..760553 (+) 459 WP_053578501.1 hypothetical protein -
  H0S58_RS03500 (H0S58_03500) dapE 760629..761765 (-) 1137 WP_195727157.1 succinyl-diaminopimelate desuccinylase -
  H0S58_RS03505 (H0S58_03505) - 761879..762031 (-) 153 WP_171250309.1 entericidin A/B family lipoprotein -
  H0S58_RS03510 (H0S58_03510) - 762157..763023 (-) 867 WP_195727158.1 DUF1853 family protein -
  H0S58_RS03515 (H0S58_03515) - 763120..763503 (+) 384 WP_092717279.1 YbaN family protein -
  H0S58_RS03520 (H0S58_03520) elsL 763511..764026 (+) 516 WP_195727159.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1455 a.a.        Molecular weight: 164435.85 Da        Isoelectric Point: 4.5019

>NTDB_id=467038 H0S58_RS03490 WP_195727156.1 755723..760090(+) (chpA) [Acinetobacter sp. TTH0-4 strain 1BD1]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNPLLIDWFANPNDPEILTTIRRHFHTLKGSGRMVGAKSA
GELAWAVEDSLNRVISGAIPLDMTVQRYTQTVFKIYQYKLYPIFKTVQTIDIDLRPLVLLGQHIQQNRILAPELEQLLEL
STTLNAENQITGLELEESESNATDSLASQASDIEETVAIFIEEAEEHLAIIEQFLKNEHNQSQGYNSLIRALHTLRGSSS
MAQIEHIFEVSSKVESLFKTLLQEEIISSSKQTAILMQYAEFIGDYLHTLRLGQTEKLDTIFATFNTAWNNYGFASTEFD
SELNPQGIVSKLIALNIDLLLDAEFEFEKRAKSEYPEYLKKLAEQAQQLLIHTDNRAATGIYDFTQELKLNYEALVLKPE
LLNIDYAYELFSYAHQEFIHLFDTLAAGQRVILTDEVQKILSDLSAFVQQDLEQFKTTEAVQAKPLETVNNLSTSIDLAK
ISQRIRSDRAHMQAEDANQEFDADLLDIFLEEAEELLAGIDQDLNTWSKDYTDTTSLNNLMRYLHTLKGGANMILASHIG
LIAHELESIYERVIRQQIQATPQLISIIRLIQDDIADRIQIIREQHLDYSGRESIAILQNIQDLAQVGSIEELASEISEV
AHLAEQPVESTEIGLTEPEKVQENISSHLDAAHDPEESIRSIAEEAFFEEAEEILDSTDQLLKQWFEQRSDRSLLLQLQR
AAHSIKGGARMVENEPVAVISYQLETTFEQFAVHHFNSNAYDSLLESTFIWLRKAIFDQDYSHFDSLKLSLESIEFVDVT
AQIPTRVSKFDHTSAPKIIEFVQGDGTEPPAMLGEWDSSTQLENNNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQL
GHTLNEMELAMKRLADQLRRMEGELESQIIAKHGSENSRYIDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIR
DTEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPTELVVNNTEGELDRTILERLVTPFEHMLRNA
IDHGIEDAEQRIQTKKPAIGHIELNISRQGTDVLVSFSDDGKGIDEKNIQQKALNLGLIEADQSLDKRELLQFIFHPGFS
TAKEVTQISGRGVGLDVVQSEIKALGGHVTVDSELGQGTTFTIRVPTTVSVSDALMVKAGDQQFAISLAQIERIVRISPS
ALEDYFNSKEDFFKIDNTSYKLRYLSEFVANQPLPRLSHVAHSLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPIGQQF
SSVGVVAGATILGDGQVCLILDGQNIARQIQATQRLKHAVEQRELSRHNDARRLIMIVDDSVTVRKVTSRLLERQGYDIV
TAKDGVDAIEQLESIKPDLMLLDIEMPRMDGFEVTNLVRHHEIHKDLPIIMITSRTGEKHRERAFSLGVSHYMGKPFQEA
ELLSHVEHLLEMSQG

Nucleotide


Download         Length: 4368 bp        

>NTDB_id=467038 H0S58_RS03490 WP_195727156.1 755723..760090(+) (chpA) [Acinetobacter sp. TTH0-4 strain 1BD1]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACCACGCTTCCTGAAGATAGCTATCTTGATCAGGATGCAGAGATTTT
AGAAATTTTTGTTGAAGAAATAGAAGAAATTTTTGTTGAATTGAATCCATTATTAATCGATTGGTTTGCAAACCCGAATG
ATCCAGAAATTTTAACGACTATTCGTCGTCATTTTCATACTCTCAAAGGTTCTGGGCGTATGGTGGGGGCGAAATCTGCA
GGCGAGCTTGCTTGGGCTGTAGAGGATAGCTTAAATCGCGTTATTTCAGGTGCAATTCCTTTAGATATGACAGTACAGCG
CTATACGCAAACTGTATTTAAAATTTATCAATATAAGTTGTACCCCATTTTTAAAACTGTACAAACGATAGATATCGACT
TGCGTCCATTGGTTTTATTAGGTCAACACATACAGCAAAATCGAATTTTAGCACCTGAACTGGAACAGCTCCTTGAGCTG
TCTACCACATTGAATGCAGAAAACCAAATTACAGGGTTGGAGTTAGAAGAGTCAGAGTCAAACGCAACTGATAGTCTTGC
AAGTCAAGCGAGTGACATTGAAGAAACAGTGGCAATCTTTATTGAAGAAGCTGAAGAACATTTGGCGATTATTGAACAAT
TCTTAAAAAATGAACACAACCAAAGTCAGGGTTATAATAGCTTAATCCGTGCCCTACATACTTTGCGTGGCAGTTCATCC
ATGGCACAAATTGAACATATTTTTGAAGTCAGCAGTAAGGTTGAAAGTTTATTTAAAACACTTCTACAAGAAGAAATTAT
TTCGTCTTCAAAGCAAACTGCGATTTTAATGCAATATGCAGAATTTATTGGGGATTATTTACATACCTTAAGGCTGGGAC
AAACAGAAAAACTCGATACGATTTTTGCAACATTCAATACTGCATGGAATAACTATGGTTTTGCTTCAACTGAATTTGAT
TCAGAGCTTAATCCTCAAGGGATAGTGTCTAAACTCATTGCTTTAAATATCGATTTATTATTAGATGCAGAATTTGAATT
TGAAAAACGTGCTAAATCAGAATATCCAGAATATCTCAAAAAATTAGCTGAGCAAGCACAACAACTTTTAATTCATACAG
ATAATCGTGCTGCAACAGGAATTTATGATTTTACTCAGGAACTAAAATTAAATTATGAAGCGCTTGTTTTAAAACCAGAA
TTACTCAATATTGACTATGCTTATGAGCTATTTTCATACGCTCATCAAGAATTTATTCATCTGTTTGATACCTTGGCAGC
AGGACAACGTGTCATCTTGACCGATGAAGTACAGAAAATCTTAAGTGATCTTTCTGCTTTTGTGCAACAAGACCTAGAGC
AATTTAAAACCACTGAAGCTGTACAAGCAAAACCGCTTGAAACTGTAAATAATCTATCTACAAGTATTGATTTAGCAAAA
ATTTCTCAAAGAATCCGTTCGGATCGTGCACACATGCAGGCAGAGGATGCCAATCAGGAATTTGATGCCGACCTGTTGGA
TATTTTCCTTGAAGAAGCTGAAGAGCTATTGGCCGGTATTGACCAAGATTTAAATACTTGGTCAAAAGATTATACAGATA
CTACATCTCTAAATAATTTAATGCGTTATTTGCACACTTTGAAAGGTGGCGCAAACATGATTTTAGCATCACATATTGGT
TTGATTGCGCATGAATTAGAATCAATTTATGAGCGTGTGATTCGTCAACAGATTCAAGCTACGCCTCAGCTCATCAGTAT
TATTCGCCTGATACAAGATGATATTGCCGATCGAATTCAAATTATTCGTGAGCAACACCTTGATTATTCAGGTCGTGAAT
CTATTGCTATCTTGCAAAATATTCAAGACCTTGCACAAGTTGGAAGCATAGAGGAGCTGGCTTCTGAAATTTCTGAAGTT
GCGCATCTAGCTGAGCAACCCGTTGAATCTACCGAAATAGGCCTAACTGAACCAGAGAAAGTTCAGGAAAATATTTCATC
TCATCTTGACGCTGCTCATGATCCCGAAGAAAGTATCCGTTCAATTGCGGAAGAAGCATTCTTTGAAGAAGCAGAAGAAA
TTTTAGACTCTACCGATCAGTTGCTAAAACAGTGGTTTGAGCAGCGTAGCGACCGTAGCTTACTTCTACAATTACAACGT
GCAGCCCACAGTATTAAAGGTGGAGCACGAATGGTTGAAAATGAACCCGTCGCTGTTATTTCGTATCAGTTAGAAACGAC
ATTCGAGCAGTTTGCAGTCCATCATTTTAATTCAAATGCTTACGATTCTTTATTGGAAAGTACCTTTATCTGGTTGAGAA
AAGCAATTTTCGATCAGGACTATAGTCATTTTGACAGTTTAAAGCTGAGTTTAGAATCTATTGAATTTGTGGATGTTACT
GCACAAATTCCAACACGTGTGAGTAAATTTGATCACACTTCTGCGCCTAAAATCATTGAATTTGTTCAAGGAGATGGCAC
TGAACCGCCTGCGATGTTGGGCGAGTGGGATTCAAGTACTCAATTAGAAAATAATAACGAGATGATTCGTATCTCTGCCG
ATTTGGTAGAGAAGATGATTGATCTATCTGGCGAAAATGCGATTAACCGATCCCGTATTGAAATGGATTTGGGTCAGCTA
GGTCATACTTTAAACGAAATGGAATTGGCGATGAAGCGTTTAGCTGACCAATTACGTCGTATGGAAGGTGAGTTAGAGTC
ACAAATTATTGCAAAACATGGTTCAGAAAACTCTCGTTATATCGATTTTGATCCTTTAGAGATGGATCAATATTCATCTC
TCAATCAATTGTCTAAATCTTTGGCTGAGTCAGCCTCAGATTTGGTCGACTTTAAAACCACTTTGGCTGAAAAAATTCGT
GATACTGAAGGATTGTTATTGCAGCAATCACGTATTCAGGCAGAAATTCAAGAAAGTCTGATGCGGACTCGACTGGTGCC
TTTCTCGCGTTTATTACCGCGTCTACAGCGCATTGTACGCCAGACTTCCTCTACGTTAAATCGTCCCACGGAATTGGTGG
TAAATAACACCGAAGGTGAGCTGGATCGCACGATTTTAGAGCGTTTGGTGACACCATTTGAACATATGTTACGTAATGCG
ATTGATCATGGTATTGAGGATGCAGAGCAACGCATTCAGACTAAAAAACCTGCAATTGGGCATATTGAACTGAATATTAG
CCGTCAGGGCACAGATGTATTGGTATCTTTTAGTGATGATGGTAAAGGTATTGATGAAAAAAATATTCAACAAAAAGCCT
TAAACTTAGGTTTAATTGAAGCTGATCAGTCGTTGGATAAGCGAGAACTTCTTCAATTTATTTTTCATCCAGGTTTTAGT
ACCGCTAAAGAAGTCACACAAATTTCTGGCCGTGGTGTAGGACTTGATGTTGTTCAAAGTGAGATTAAAGCTTTAGGTGG
TCATGTCACAGTTGACTCTGAATTAGGTCAAGGAACCACTTTCACGATTCGAGTACCGACCACTGTATCGGTGAGTGATG
CCTTAATGGTTAAAGCGGGAGATCAACAGTTTGCGATTTCTTTGGCCCAAATTGAGCGTATTGTCCGGATTTCACCTTCT
GCACTGGAAGACTATTTTAATAGTAAAGAAGATTTCTTTAAAATTGATAATACCAGTTATAAATTGCGCTATTTATCGGA
GTTTGTCGCCAATCAACCTCTACCTCGCTTAAGCCATGTTGCACATTCATTGCCTGTATTATTAATTAAAGGCAATAGTG
GTCAAACCATCGCATTATTGGTGGATCAATTAATTGGTTCACGCGCACAGATTGTAGTTAAGCCGATAGGGCAGCAGTTC
TCAAGCGTAGGCGTGGTGGCAGGCGCAACTATTTTGGGTGATGGGCAGGTTTGTCTGATTTTAGATGGTCAAAATATTGC
ACGTCAAATTCAAGCGACGCAGCGACTAAAACATGCGGTAGAACAACGTGAATTATCGCGTCATAATGATGCTCGTCGCT
TGATCATGATTGTGGATGATTCCGTGACAGTACGTAAGGTAACCTCTCGTCTGCTGGAGCGTCAGGGCTACGATATTGTA
ACTGCCAAAGATGGTGTGGATGCAATAGAACAGCTTGAAAGTATAAAACCTGACTTGATGTTGCTTGATATTGAAATGCC
ACGTATGGATGGTTTCGAGGTAACCAATTTGGTTCGTCATCATGAGATACATAAGGATTTACCTATTATCATGATTACCT
CGCGAACAGGTGAAAAACATCGTGAACGTGCATTCAGCCTAGGCGTCTCACATTACATGGGCAAGCCCTTTCAAGAGGCA
GAACTTCTCAGCCATGTTGAACACTTGTTAGAGATGAGTCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.667

100

0.636