Detailed information NTG0466644

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H0N28_RS07945
• Genome accession: NZ_CP059041
• Coordinates: 1693491..1694192 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ATCC 17978
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1688491..1699192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0N28_RS07910 (H0N28_07905)	kdsB	1689014..1689775 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
H0N28_RS07915 (H0N28_07910)	-	1689787..1690767 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
H0N28_RS07920 (H0N28_07915)	-	1690779..1691120 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
H0N28_RS07925 (H0N28_07920)	-	1691138..1691911 (+)	774	WP_000497298.1	TatD family hydrolase	-
H0N28_RS07930 (H0N28_07925)	-	1691949..1692557 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
H0N28_RS07935 (H0N28_07930)	-	1692567..1693121 (+)	555	WP_000841375.1	type II secretion system protein	-
H0N28_RS07940 (H0N28_07935)	xcpV	1693111..1693491 (+)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
H0N28_RS07945 (H0N28_07940)	xcpW	1693491..1694192 (+)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H0N28_RS07950 (H0N28_07945)	gspK	1694192..1695151 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
H0N28_RS07955 (H0N28_07950)	-	1695381..1695977 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
H0N28_RS07960 (H0N28_07955)	ung	1696028..1696741 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
H0N28_RS07965 (H0N28_07960)	-	1696738..1697862 (+)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
H0N28_RS07970 (H0N28_07965)	tadA	1697869..1698372 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
H0N28_RS07975 (H0N28_07970)	-	1698442..1698885 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=466644 H0N28_RS07945 WP_000594584.1 1693491..1694192(+) (xcpW) [Acinetobacter baumannii strain ATCC 17978]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=466644 H0N28_RS07945 WP_000594584.1 1693491..1694192(+) (xcpW) [Acinetobacter baumannii strain ATCC 17978]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996