Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   JQ490_RS08050 Genome accession   NZ_CP069378
Coordinates   1637747..1638529 (-) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1632747..1643529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQ490_RS08020 (JQ490_08020) - 1633052..1634041 (-) 990 WP_003131562.1 mevalonate kinase -
  JQ490_RS08025 (JQ490_08025) mvaD 1634028..1634984 (-) 957 WP_010905319.1 diphosphomevalonate decarboxylase -
  JQ490_RS08030 (JQ490_08030) mvk 1635290..1636222 (+) 933 WP_003131564.1 mevalonate kinase -
  JQ490_RS08035 (JQ490_08035) - 1636285..1636476 (+) 192 WP_003131566.1 hypothetical protein -
  JQ490_RS08040 (JQ490_08040) rsmI 1636553..1637428 (-) 876 WP_010905318.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  JQ490_RS08045 (JQ490_08045) yabA 1637428..1637754 (-) 327 WP_010905317.1 DNA replication initiation control protein YabA -
  JQ490_RS08050 (JQ490_08050) yaaT 1637747..1638529 (-) 783 WP_010905316.1 stage 0 sporulation family protein Regulator
  JQ490_RS08055 (JQ490_08055) - 1638581..1639441 (-) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  JQ490_RS08060 (JQ490_08060) tmk 1639574..1640209 (-) 636 WP_003131575.1 dTMP kinase -
  JQ490_RS08065 (JQ490_08065) yycF 1640387..1641088 (+) 702 WP_003131580.1 response regulator YycF -
  JQ490_RS08070 (JQ490_08070) vicK 1641081..1642523 (+) 1443 WP_010905315.1 cell wall metabolism sensor histidine kinase WalK Regulator
  JQ490_RS08075 (JQ490_08075) vicX 1642694..1643506 (+) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=466330 JQ490_RS08050 WP_010905316.1 1637747..1638529(-) (yaaT) [Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=466330 JQ490_RS08050 WP_010905316.1 1637747..1638529(-) (yaaT) [Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388