Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | HZ310_RS18750 | Genome accession | NZ_CP058951 |
| Coordinates | 3654175..3656610 (-) | Length | 811 a.a. |
| NCBI ID | WP_003216969.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain UAMX | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3649175..3661610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZ310_RS18725 (HZ310_18725) | ispF | 3649183..3649659 (-) | 477 | WP_180309713.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| HZ310_RS18730 (HZ310_18730) | ispD | 3649663..3650352 (-) | 690 | WP_061406507.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| HZ310_RS18735 (HZ310_18735) | - | 3650366..3651466 (-) | 1101 | WP_058015822.1 | PIN/TRAM domain-containing protein | - |
| HZ310_RS18740 (HZ310_18740) | disA | 3651620..3652699 (-) | 1080 | WP_012008686.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| HZ310_RS18745 (HZ310_18745) | radA | 3652702..3654081 (-) | 1380 | WP_058015795.1 | DNA repair protein RadA | Machinery gene |
| HZ310_RS18750 (HZ310_18750) | clpC | 3654175..3656610 (-) | 2436 | WP_003216969.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| HZ310_RS18755 (HZ310_18755) | - | 3656607..3657698 (-) | 1092 | WP_003217181.1 | protein arginine kinase | - |
| HZ310_RS18760 (HZ310_18760) | - | 3657703..3658260 (-) | 558 | WP_034665655.1 | UvrB/UvrC motif-containing protein | - |
| HZ310_RS18765 (HZ310_18765) | - | 3658275..3658739 (-) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90030.78 Da Isoelectric Point: 6.1821
>NTDB_id=466118 HZ310_RS18750 WP_003216969.1 3654175..3656610(-) (clpC) [Bacillus pumilus strain UAMX]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVEDG
EIVVKTTAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVEDG
EIVVKTTAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=466118 HZ310_RS18750 WP_003216969.1 3654175..3656610(-) (clpC) [Bacillus pumilus strain UAMX]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGTACTGAACACATTTTACTTGGTCTTGTACGCGAGGGAGAGGGTATTGCCGCAAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCAATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGCGTTTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGCAGCAATGAAACAGGTGCATCTGCCGCTGGCTCTAACAGCAATGCAAAT
ACACCAACATTAGATAGCTTGGCAAGAGATTTAACAGCGATTGCGAAAGAAGACAGCTTGGACCCTGTCATTGGACGAAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGCAGAAGAACAAAAAACAACCCTGTGCTGATTGGTGAGCCCGGTGTTG
GTAAAACAGCCATCGCTGAAGGTCTTGCACAGCAAATTATTCATAATGAAGTGCCTGAAATTCTGCGGGATAAACGAGTG
ATGACGCTTGATATGGGAACCGTTGTAGCAGGCACGAAATATCGTGGTGAATTTGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCTGGCGGAGCAGAAGGTG
CGATTGACGCATCTAATATTCTCAAACCATCCTTAGCACGTGGAGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCATCCGTTGATGA
AAGTATTCAAATCTTAAGAGGTCTTAGAGATCGTTATGAGGCACATCACCGTGTGTCCATCACAGATGAAGCGATTGAGG
CGGCGGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCTTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGTTGGATGAAGTGCGCAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTACGTGAAAAAG
TAGAAGTCACAAAGAAATCTTGGAAAGAAAAGCAAGGTCAGGAGAATTCAGAGGTATCAGTGGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACAGAAACAGATAAGCTTCTGAATATGGAACAATTACT
CCATTCTCGTGTAATCGGGCAGGATGAAGCGGTTGTCGCTGTAGCAAAAGCTGTGAGACGTGCGCGTGCTGGTCTAAAAG
ATCCAAAACGTCCAATCGGCTCCTTTATCTTCTTAGGCCCAACAGGGGTTGGTAAAACGGAGCTTGCAAGAGCACTTGCG
GAGTCTATTTTTGGTGATGAAGAAGCGATGATCCGTATCGATATGTCTGAATACATGGAGAAACATTCTACATCTAGACT
TGTTGGGTCACCTCCAGGCTATGTTGGCTATGAAGAAGGCGGACAACTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTCAACATCTTACTGCAAGTATTAGAAGATGGTCGTCTG
ACGGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCCAACGTTGGAGCTAGTGAACTGAA
GCGAAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAAGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCAGAATTCATCAACCGTATTGATGAAATTATTGTCTTCCATTCACTTGAAAAGAAACATTTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATTGAATTGACAGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGACCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGATCGACTTTCTGAGGAGCTTTTAAAGGGTAATATTGAAAAAGGTCAACAAATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAACGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGTACTGAACACATTTTACTTGGTCTTGTACGCGAGGGAGAGGGTATTGCCGCAAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCAATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGCGTTTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGCAGCAATGAAACAGGTGCATCTGCCGCTGGCTCTAACAGCAATGCAAAT
ACACCAACATTAGATAGCTTGGCAAGAGATTTAACAGCGATTGCGAAAGAAGACAGCTTGGACCCTGTCATTGGACGAAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGCAGAAGAACAAAAAACAACCCTGTGCTGATTGGTGAGCCCGGTGTTG
GTAAAACAGCCATCGCTGAAGGTCTTGCACAGCAAATTATTCATAATGAAGTGCCTGAAATTCTGCGGGATAAACGAGTG
ATGACGCTTGATATGGGAACCGTTGTAGCAGGCACGAAATATCGTGGTGAATTTGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCTGGCGGAGCAGAAGGTG
CGATTGACGCATCTAATATTCTCAAACCATCCTTAGCACGTGGAGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCATCCGTTGATGA
AAGTATTCAAATCTTAAGAGGTCTTAGAGATCGTTATGAGGCACATCACCGTGTGTCCATCACAGATGAAGCGATTGAGG
CGGCGGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCTTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGTTGGATGAAGTGCGCAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTACGTGAAAAAG
TAGAAGTCACAAAGAAATCTTGGAAAGAAAAGCAAGGTCAGGAGAATTCAGAGGTATCAGTGGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACAGAAACAGATAAGCTTCTGAATATGGAACAATTACT
CCATTCTCGTGTAATCGGGCAGGATGAAGCGGTTGTCGCTGTAGCAAAAGCTGTGAGACGTGCGCGTGCTGGTCTAAAAG
ATCCAAAACGTCCAATCGGCTCCTTTATCTTCTTAGGCCCAACAGGGGTTGGTAAAACGGAGCTTGCAAGAGCACTTGCG
GAGTCTATTTTTGGTGATGAAGAAGCGATGATCCGTATCGATATGTCTGAATACATGGAGAAACATTCTACATCTAGACT
TGTTGGGTCACCTCCAGGCTATGTTGGCTATGAAGAAGGCGGACAACTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTCAACATCTTACTGCAAGTATTAGAAGATGGTCGTCTG
ACGGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCCAACGTTGGAGCTAGTGAACTGAA
GCGAAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAAGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCAGAATTCATCAACCGTATTGATGAAATTATTGTCTTCCATTCACTTGAAAAGAAACATTTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATTGAATTGACAGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGACCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGATCGACTTTCTGAGGAGCTTTTAAAGGGTAATATTGAAAAAGGTCAACAAATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAACGACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.931 |
100 |
0.959 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.136 |
99.877 |
0.491 |
| clpC | Streptococcus thermophilus LMD-9 |
46.247 |
100 |
0.471 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.884 |
100 |
0.467 |
| clpC | Streptococcus pneumoniae Rx1 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus pneumoniae D39 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.509 |
87.916 |
0.435 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |