Detailed information NTG0466107

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: HZ310_RS13840
• Genome accession: NZ_CP058951
• Coordinates: 2626967..2627929 (-)
• Length: 320 a.a.
• NCBI ID: WP_180309239.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain UAMX
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2621967..2632929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HZ310_RS13810 (HZ310_13810)	-	2622123..2623103 (-)	981	WP_180309236.1	ABC transporter ATP-binding protein	-
HZ310_RS13815 (HZ310_13815)	-	2623264..2624067 (-)	804	WP_180309237.1	DUF2268 domain-containing protein	-
HZ310_RS13820 (HZ310_13820)	fabF	2624144..2625385 (-)	1242	WP_012009553.1	beta-ketoacyl-ACP synthase II	-
HZ310_RS13825 (HZ310_13825)	-	2625407..2626345 (-)	939	WP_012009552.1	beta-ketoacyl-ACP synthase III	-
HZ310_RS13830 (HZ310_13830)	-	2626515..2626748 (+)	234	WP_058014311.1	hypothetical protein	-
HZ310_RS13835 (HZ310_13835)	comZ	2626759..2626956 (-)	198	WP_180309238.1	ComZ family protein	Regulator
HZ310_RS13840 (HZ310_13840)	med	2626967..2627929 (-)	963	WP_180309239.1	BMP family ABC transporter substrate-binding protein	Regulator
HZ310_RS13845 (HZ310_13845)	-	2628020..2628595 (-)	576	WP_180309240.1	nad binding enzyme	-
HZ310_RS13850 (HZ310_13850)	-	2628671..2629411 (-)	741	WP_058014314.1	hypothetical protein	-
HZ310_RS13855 (HZ310_13855)	-	2629623..2629817 (+)	195	WP_003211779.1	YjzD family protein	-
HZ310_RS13860 (HZ310_13860)	-	2629932..2631197 (-)	1266	WP_058014315.1	MFS transporter	-
HZ310_RS13865 (HZ310_13865)	-	2631367..2631546 (-)	180	WP_003211282.1	YjzC family protein	-
HZ310_RS13870 (HZ310_13870)	argF	2631649..2632599 (-)	951	WP_180309241.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35605.46 Da
• Isoelectric Point: 4.9922

>NTDB_id=466107 HZ310_RS13840 WP_180309239.1 2626967..2627929(-) (med) [Bacillus pumilus strain UAMX]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEEIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYGIIAKKFNEGKLNAQGEYSFDFKEGVIEMGKFSSTIDRAFLKDIESDIATYIKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=466107 HZ310_RS13840 WP_180309239.1 2626967..2627929(-) (med) [Bacillus pumilus strain UAMX]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACTATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGGAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAATTTAATCAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTTGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCTGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAACAAGGCGTAGATGTTGTATATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACCGATCAATCC
AACCTCGGCAGCCATACCGTTTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACGGTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAATGCACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCTA
CCATTGACCGTGCTTTTTTGAAAGACATTGAAAGTGATATTGCGACTTACATAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-319)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	63.898	97.813	0.625