Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HZ310_RS13835 Genome accession   NZ_CP058951
Coordinates   2626759..2626956 (-) Length   65 a.a.
NCBI ID   WP_180309238.1    Uniprot ID   -
Organism   Bacillus pumilus strain UAMX     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2621759..2631956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZ310_RS13810 (HZ310_13810) - 2622123..2623103 (-) 981 WP_180309236.1 ABC transporter ATP-binding protein -
  HZ310_RS13815 (HZ310_13815) - 2623264..2624067 (-) 804 WP_180309237.1 DUF2268 domain-containing protein -
  HZ310_RS13820 (HZ310_13820) fabF 2624144..2625385 (-) 1242 WP_012009553.1 beta-ketoacyl-ACP synthase II -
  HZ310_RS13825 (HZ310_13825) - 2625407..2626345 (-) 939 WP_012009552.1 beta-ketoacyl-ACP synthase III -
  HZ310_RS13830 (HZ310_13830) - 2626515..2626748 (+) 234 WP_058014311.1 hypothetical protein -
  HZ310_RS13835 (HZ310_13835) comZ 2626759..2626956 (-) 198 WP_180309238.1 ComZ family protein Regulator
  HZ310_RS13840 (HZ310_13840) med 2626967..2627929 (-) 963 WP_180309239.1 BMP family ABC transporter substrate-binding protein Regulator
  HZ310_RS13845 (HZ310_13845) - 2628020..2628595 (-) 576 WP_180309240.1 nad binding enzyme -
  HZ310_RS13850 (HZ310_13850) - 2628671..2629411 (-) 741 WP_058014314.1 hypothetical protein -
  HZ310_RS13855 (HZ310_13855) - 2629623..2629817 (+) 195 WP_003211779.1 YjzD family protein -
  HZ310_RS13860 (HZ310_13860) - 2629932..2631197 (-) 1266 WP_058014315.1 MFS transporter -
  HZ310_RS13865 (HZ310_13865) - 2631367..2631546 (-) 180 WP_003211282.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7347.37 Da        Isoelectric Point: 4.2412

>NTDB_id=466106 HZ310_RS13835 WP_180309238.1 2626759..2626956(-) (comZ) [Bacillus pumilus strain UAMX]
MQHERSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESGKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=466106 HZ310_RS13835 WP_180309238.1 2626759..2626956(-) (comZ) [Bacillus pumilus strain UAMX]
ATGCAGCACGAAAGATCGATGGAGTTTTTACAAATTGCCATGAAGTATTTTCCTCAGGCAAAAGAAGAATTAGATAAAGC
AGGTATTCAGCTTGAGCCCGAAGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGAATCAGGAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70

92.308

0.646