Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HU825_RS06610 Genome accession   NZ_CP058908
Coordinates   1391219..1391626 (+) Length   135 a.a.
NCBI ID   WP_234303167.1    Uniprot ID   -
Organism   Pseudomonas phenolilytica strain RBPA9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1386219..1396626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HU825_RS06580 (HU825_06570) - 1386427..1387443 (-) 1017 WP_043299509.1 aspartate carbamoyltransferase catalytic subunit -
  HU825_RS06585 (HU825_06575) pyrR 1387453..1387965 (-) 513 WP_102829093.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HU825_RS06590 (HU825_06580) ruvX 1387988..1388416 (-) 429 WP_043299511.1 Holliday junction resolvase RuvX -
  HU825_RS06595 (HU825_06585) - 1388413..1388982 (-) 570 WP_043299512.1 YqgE/AlgH family protein -
  HU825_RS06600 (HU825_06590) - 1389056..1389949 (-) 894 WP_043299513.1 energy transducer TonB -
  HU825_RS06605 (HU825_06595) gshB 1390036..1390986 (-) 951 WP_077682770.1 glutathione synthase -
  HU825_RS06610 (HU825_06600) pilG 1391219..1391626 (+) 408 WP_234303167.1 twitching motility response regulator PilG Regulator
  HU825_RS06615 (HU825_06605) pilH 1391668..1392033 (+) 366 WP_008568495.1 twitching motility response regulator PilH -
  HU825_RS06620 (HU825_06610) - 1392096..1392632 (+) 537 WP_234303168.1 chemotaxis protein CheW -
  HU825_RS06625 (HU825_06615) - 1392708..1394756 (+) 2049 WP_043299515.1 methyl-accepting chemotaxis protein -
  HU825_RS06630 (HU825_06620) - 1394820..1395686 (+) 867 WP_234303169.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14868.30 Da        Isoelectric Point: 7.2439

>NTDB_id=465924 HU825_RS06610 WP_234303167.1 1391219..1391626(+) (pilG) [Pseudomonas phenolilytica strain RBPA9]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFVPIEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=465924 HU825_RS06610 WP_234303167.1 1391219..1391626(+) (pilG) [Pseudomonas phenolilytica strain RBPA9]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGATGATTCGAAAACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAAGTAGGTTGTGACGTCATCACGGCGGTGGATGGCTTCGATGCGCTCGCCAAGATCGCCGATACCCATCCGCGTA
TCATCTTTGTCGATATCATGATGCCTCGACTCGATGGTTATCAGACCTGCGCCTTGATCAAGAACAACAGCTCGTTCAAA
TCGACGCCGGTGATCATGCTGTCCTCCAAGGATGGCTTGTTCGACAAGGCGAAAGGGCGCATCGTCGGCTCCGATCAATA
CCTCACCAAACCTTTCAGTAAGGAAGAGCTGCTCGGCGCCATCAAGGCTCACGTTCCTGATTTCGTACCCATCGAGCAGG
CATCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

43.651

93.333

0.407