Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   HZU50_RS07980 Genome accession   NZ_CP058891
Coordinates   1656694..1657962 (-) Length   422 a.a.
NCBI ID   WP_010729308.1    Uniprot ID   -
Organism   Enterococcus faecium strain ef332     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1651694..1662962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZU50_RS07975 (HZU50_07975) - 1654917..1656626 (-) 1710 WP_002347409.1 proline--tRNA ligase -
  HZU50_RS07980 (HZU50_07980) eeP 1656694..1657962 (-) 1269 WP_010729308.1 RIP metalloprotease RseP Regulator
  HZU50_RS07985 (HZU50_07985) - 1658123..1658923 (-) 801 WP_002294135.1 phosphatidate cytidylyltransferase -
  HZU50_RS07990 (HZU50_07990) - 1658920..1659732 (-) 813 WP_002294134.1 isoprenyl transferase -
  HZU50_RS07995 (HZU50_07995) frr 1659927..1660484 (-) 558 WP_002293875.1 ribosome recycling factor -
  HZU50_RS08000 (HZU50_08000) pyrH 1660487..1661209 (-) 723 WP_002293877.1 UMP kinase -
  HZU50_RS08005 (HZU50_08005) tsf 1661345..1662226 (-) 882 WP_002293878.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46104.53 Da        Isoelectric Point: 4.8405

>NTDB_id=465866 HZU50_RS07980 WP_010729308.1 1656694..1657962(-) (eeP) [Enterococcus faecium strain ef332]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSRKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIENDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIMPNGAAAEAGLKENDEVVSVDGKEIHSWN
DLTTVITKNPGKTLDFKIEREGQVQSVDVTPKSVESNGEKVGQLGIKAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVISLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=465866 HZU50_RS07980 WP_010729308.1 1656694..1657962(-) (eeP) [Enterococcus faecium strain ef332]
ATGAAAACGATTCTGACATTTATCATCGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTCCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGAATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAGGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGACGAAACAG
AAGTAGTAACCTACCCTGTTGATCACGATGCGACGATTATTGAAAACGACGGAACAGAAATCAGAATTGCGCCAAAAGAC
GTACAGTTCCAATCGGCTAAATTGTGGCAGCGTATGCTGACCAACTTTGCTGGACCCATGAATAACTTTATTTTGGCAAT
CGTGTTATTCATCATTCTGGCATTTATGCAAGGTGGTGTTCAAGTGACGAACACTAATCGCGTAGGAGAGATCATGCCTA
ATGGAGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATGAGGTAGTCAGTGTGGACGGAAAAGAAATCCATTCATGGAAT
GATCTGACAACAGTCATTACGAAAAATCCAGGTAAAACATTAGACTTTAAGATCGAACGAGAAGGTCAGGTGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGTATAAAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATTGGAGGGACGCGTCAAGCTTTCAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTATTT
ACAGGTTTCAGTTTAGATAAATTAGGCGGACCTGTCATGATGTACCAATTGTCTTCAGAAGCAGCAAATCAAGGTGTAAC
AACTGTTATTAGTTTGATGGCGCTTCTTTCAATGAATCTCGGAATCGTCAATCTGCTTCCGATTCCTGCCTTAGATGGCG
GGAAATTAGTCTTGAATATTTTTGAAGGGATTCGCGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.206

100

0.55
  eeP Streptococcus thermophilus LMG 18311

53.972

100

0.547