Detailed information NTG0046551

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NJAUSS_RS10450
• Genome accession: NC_020526
• Coordinates: 2124679..2125773 (+)
• Length: 364 a.a.
• NCBI ID: WP_012028050.1
• Uniprot ID: A0A0H3N2H6
• Organism: Streptococcus suis SC070731
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2119679..2130773

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NJAUSS_RS10425 (NJAUSS_1994)	pgsA	2120198..2120737 (-)	540	WP_012028045.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NJAUSS_RS10430 (NJAUSS_1995)	rodZ	2120747..2121604 (-)	858	WP_012028600.1	cytoskeleton protein RodZ	-
NJAUSS_RS10435 (NJAUSS_1996)	yfmH	2121686..2122969 (-)	1284	WP_012775413.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
NJAUSS_RS10440 (NJAUSS_1997)	yfmF	2122966..2124219 (-)	1254	WP_015445380.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
NJAUSS_RS10445 (NJAUSS_1998)	yaaA	2124293..2124676 (+)	384	WP_012028049.1	S4 domain-containing protein YaaA	-
NJAUSS_RS10450 (NJAUSS_1999)	recF	2124679..2125773 (+)	1095	WP_012028050.1	DNA replication/repair protein RecF	Machinery gene
NJAUSS_RS10455 (NJAUSS_2000)	guaB	2126045..2127526 (-)	1482	WP_012028051.1	IMP dehydrogenase	-
NJAUSS_RS10460 (NJAUSS_2001)	trpS	2127758..2128783 (-)	1026	WP_012775414.1	tryptophan--tRNA ligase	-
NJAUSS_RS10465 (NJAUSS_2002)	-	2129138..2130010 (+)	873	WP_012775460.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42188.24 Da
• Isoelectric Point: 6.9173

>NTDB_id=46551 NJAUSS_RS10450 WP_012028050.1 2124679..2125773(+) (recF) [Streptococcus suis SC070731]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYASQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=46551 NJAUSS_RS10450 WP_012028050.1 2124679..2125773(+) (recF) [Streptococcus suis SC070731]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGACGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCTGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAGACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAACTAGAAAAGTCTCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGCTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTATTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A0H3N2H6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.36	99.176	0.698
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442