Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SSU1300283_RS01700 Genome accession   NZ_CP058741
Coordinates   343775..345034 (+) Length   419 a.a.
NCBI ID   WP_014637190.1    Uniprot ID   -
Organism   Streptococcus suis strain 13-00283-02     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 338775..350034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSU1300283_RS01680 (SSU1300283_00338) - 340355..341647 (+) 1293 WP_002937782.1 adenylosuccinate synthase -
  SSU1300283_RS01685 (SSU1300283_00339) yajC 341757..342080 (+) 324 WP_014637193.1 preprotein translocase subunit YajC -
  SSU1300283_RS01690 (SSU1300283_00340) - 342194..342949 (+) 756 WP_013730586.1 isoprenyl transferase -
  SSU1300283_RS01695 (SSU1300283_00341) - 342959..343765 (+) 807 WP_192109864.1 phosphatidate cytidylyltransferase -
  SSU1300283_RS01700 (SSU1300283_00342) eeP 343775..345034 (+) 1260 WP_014637190.1 RIP metalloprotease RseP Regulator
  SSU1300283_RS01705 (SSU1300283_00344) - 345258..347120 (+) 1863 WP_024390942.1 proline--tRNA ligase -
  SSU1300283_RS01710 (SSU1300283_00345) - 347458..348168 (-) 711 WP_014637188.1 MIP/aquaporin family protein -
  SSU1300283_RS01715 (SSU1300283_00346) dhaM 348178..348552 (-) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  SSU1300283_RS01720 (SSU1300283_00347) dhaL 348549..349124 (-) 576 WP_014637187.1 dihydroxyacetone kinase subunit DhaL -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44903.20 Da        Isoelectric Point: 5.6974

>NTDB_id=465176 SSU1300283_RS01700 WP_014637190.1 343775..345034(+) (eeP) [Streptococcus suis strain 13-00283-02]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYRVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIIGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLASVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=465176 SSU1300283_RS01700 WP_014637190.1 343775..345034(+) (eeP) [Streptococcus suis strain 13-00283-02]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAGGGTTGATCACGACGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTATCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAACCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGCTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654

  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654