Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HQ393_RS11970 Genome accession   NZ_CP058627
Coordinates   2523829..2524212 (-) Length   127 a.a.
NCBI ID   WP_179355397.1    Uniprot ID   A0A7H9BNC4
Organism   Chitinibacter bivalviorum strain 2T18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2518829..2529212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HQ393_RS11955 (HQ393_11955) - 2520686..2522854 (-) 2169 WP_246307886.1 methyl-accepting chemotaxis protein -
  HQ393_RS11960 (HQ393_11960) - 2522903..2523418 (-) 516 WP_179355395.1 chemotaxis protein CheW -
  HQ393_RS11965 (HQ393_11965) - 2523436..2523798 (-) 363 WP_179355396.1 PleD family two-component system response regulator -
  HQ393_RS11970 (HQ393_11970) pilG 2523829..2524212 (-) 384 WP_179355397.1 twitching motility response regulator PilG Regulator
  HQ393_RS11975 (HQ393_11975) yihA 2524518..2525147 (-) 630 WP_179355398.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  HQ393_RS11980 (HQ393_11980) - 2525280..2525894 (+) 615 WP_179355399.1 cytochrome c -
  HQ393_RS11985 (HQ393_11985) - 2525987..2528011 (+) 2025 WP_179355400.1 cytochrome c biogenesis protein ResB -
  HQ393_RS11990 (HQ393_11990) ccsB 2528008..2529126 (+) 1119 WP_179355401.1 c-type cytochrome biogenesis protein CcsB -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 13833.07 Da        Isoelectric Point: 7.8571

>NTDB_id=464681 HQ393_RS11970 WP_179355397.1 2523829..2524212(-) (pilG) [Chitinibacter bivalviorum strain 2T18]
MSNLAGVKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKITDHNPSVIFVDVMMPRLDGYQTCALIKKNPRFKS
TPVVMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLAAVRAHAGVV

Nucleotide


Download         Length: 384 bp        

>NTDB_id=464681 HQ393_RS11970 WP_179355397.1 2523829..2524212(-) (pilG) [Chitinibacter bivalviorum strain 2T18]
ATGTCCAATTTAGCGGGTGTTAAGGTGATGGTAATCGATGACAGTAATACCATCCGCCGTAGCGCTGAGATTTTTTTGGG
GCAAGCTGGGTGCGAGGTGATTCTGGCTGAAGATGGTTTTGATGCCTTGGCAAAAATCACAGACCATAATCCGAGCGTGA
TATTTGTCGACGTGATGATGCCGCGCCTAGATGGTTACCAGACTTGTGCTTTGATCAAGAAAAACCCGAGATTTAAGTCG
ACTCCTGTTGTAATGTTGTCATCAAAAGATGGCTTGTTCGATCGCGCACGGGGTCGGATGGTGGGGTCGGATGAGTATCT
GACCAAGCCATTTACGAAAGACAGTTTATTGGCGGCGGTGCGTGCACACGCTGGTGTCGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H9BNC4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.5

94.488

0.638
  vicR Streptococcus mutans UA159

39.655

91.339

0.362