Detailed information NTG0464520

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: LLI11_RS10700
• Genome accession: NZ_CP069223
• Coordinates: 2098759..2099835 (+)
• Length: 358 a.a.
• NCBI ID: WP_010906242.1
• Uniprot ID: Q9CE70
• Organism: Lactococcus lactis subsp. lactis strain I.1.1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2093759..2104835

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLI11_RS10675 (LLI11_10620)	pgsA	2093919..2094491 (-)	573	WP_004254763.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LLI11_RS10680 (LLI11_10625)	-	2094532..2095428 (-)	897	WP_004254758.1	RodZ family helix-turn-helix domain-containing protein	-
LLI11_RS10685 (LLI11_10630)	yfmH	2095640..2096923 (-)	1284	WP_004254752.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
LLI11_RS10690 (LLI11_10635)	yfmF	2096913..2098199 (-)	1287	WP_021214872.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
LLI11_RS10695 (LLI11_10640)	yaaA	2098397..2098759 (+)	363	WP_004254746.1	S4 domain-containing protein YaaA	-
LLI11_RS10700 (LLI11_10645)	recF	2098759..2099835 (+)	1077	WP_010906242.1	DNA replication/repair protein RecF	Machinery gene
LLI11_RS10705 (LLI11_10650)	-	2099922..2100290 (-)	369	WP_004254740.1	carboxymuconolactone decarboxylase family protein	-
LLI11_RS10710 (LLI11_10655)	-	2100368..2100745 (+)	378	WP_010906243.1	MerR family transcriptional regulator	-
LLI11_RS10715 (LLI11_10660)	-	2100758..2101702 (-)	945	WP_010906244.1	alpha/beta hydrolase	-
LLI11_RS10720 (LLI11_10665)	galE	2101825..2102805 (-)	981	WP_010906245.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=464520 LLI11_RS10700 WP_010906242.1 2098759..2099835(+) (recF) [Lactococcus lactis subsp. lactis strain I.1.1]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=464520 LLI11_RS10700 WP_010906242.1 2098759..2099835(+) (recF) [Lactococcus lactis subsp. lactis strain I.1.1]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCACCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCACAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

3D structure

• AlphaFold DB: Q9CE70

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447