Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | HW113_RS06680 | Genome accession | NZ_CP058312 |
| Coordinates | 1309377..1309676 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain BLR-DV | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1304377..1314676
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW113_RS06640 (HW113_06640) | - | 1304438..1304641 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| HW113_RS06645 (HW113_06645) | - | 1304638..1305624 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| HW113_RS06650 (HW113_06650) | - | 1305624..1305953 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| HW113_RS06655 (HW113_06655) | - | 1305950..1306573 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| HW113_RS06660 (HW113_06660) | comGA | 1306625..1307599 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HW113_RS06665 (HW113_06665) | comGB | 1307571..1308641 (+) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HW113_RS06670 (HW113_06670) | comGC | 1308655..1308966 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HW113_RS06675 (HW113_06675) | comGD | 1308944..1309390 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HW113_RS06680 (HW113_06680) | comGE | 1309377..1309676 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| HW113_RS06685 (HW113_06685) | comGF | 1309594..1310091 (+) | 498 | WP_001803317.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HW113_RS06690 (HW113_06690) | - | 1310188..1310334 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| HW113_RS06695 (HW113_06695) | - | 1310324..1310848 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| HW113_RS06700 (HW113_06700) | gcvT | 1311007..1312098 (+) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HW113_RS06705 (HW113_06705) | gcvPA | 1312118..1313464 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=463699 HW113_RS06680 WP_000844413.1 1309377..1309676(+) (comGE) [Staphylococcus aureus strain BLR-DV]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=463699 HW113_RS06680 WP_000844413.1 1309377..1309676(+) (comGE) [Staphylococcus aureus strain BLR-DV]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |