Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SAA6159_RS13485 Genome accession   NC_017338
Coordinates   2717631..2718296 (-) Length   221 a.a.
NCBI ID   WP_000697884.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus JKD6159     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2712631..2723296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAA6159_RS13465 (SAA6159_03840) - 2713101..2713214 (-) 114 WP_072468803.1 hypothetical protein -
  SAA6159_RS13470 (SAA6159_02518) - 2713873..2715873 (-) 2001 WP_000776731.1 ABC transporter permease -
  SAA6159_RS13475 (SAA6159_02519) - 2715870..2716625 (-) 756 WP_000923768.1 ABC transporter ATP-binding protein -
  SAA6159_RS13480 (SAA6159_02520) braS 2716733..2717620 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SAA6159_RS13485 (SAA6159_02521) braR 2717631..2718296 (-) 666 WP_000697884.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SAA6159_RS13490 (SAA6159_02522) - 2718322..2718522 (-) 201 WP_000604726.1 hypothetical protein -
  SAA6159_RS13495 (SAA6159_02523) - 2718720..2720144 (+) 1425 WP_000953737.1 alkaline phosphatase -
  SAA6159_RS14130 - 2720204..2720305 (-) 102 WP_000731976.1 SE2200 family small protein -
  SAA6159_RS13505 (SAA6159_02524) - 2720427..2720882 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SAA6159_RS13510 (SAA6159_02525) - 2721127..2721888 (-) 762 WP_000323443.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25406.50 Da        Isoelectric Point: 4.7961

>NTDB_id=46362 SAA6159_RS13485 WP_000697884.1 2717631..2718296(-) (braR) [Staphylococcus aureus subsp. aureus JKD6159]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=46362 SAA6159_RS13485 WP_000697884.1 2717631..2718296(-) (braR) [Staphylococcus aureus subsp. aureus JKD6159]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAACTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCAATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment