Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | HX738_RS05170 | Genome accession | NZ_CP058299 |
| Coordinates | 1008550..1008852 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain A9a | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1003550..1013852
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HX738_RS05145 (HX738_05145) | rpsR | 1003915..1004175 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| HX738_RS05150 (HX738_05150) | lon | 1004235..1006610 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| HX738_RS05155 (HX738_05155) | - | 1006627..1007274 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| HX738_RS05160 (HX738_05160) | fliW | 1007433..1007822 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| HX738_RS05165 (HX738_05165) | proC | 1007822..1008553 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| HX738_RS05170 (HX738_05170) | ctsT | 1008550..1008852 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| HX738_RS05175 (HX738_05175) | - | 1008849..1009511 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| HX738_RS05180 (HX738_05180) | - | 1009508..1009960 (+) | 453 | WP_177640540.1 | hypothetical protein | - |
| HX738_RS05185 (HX738_05185) | hemD | 1009957..1010586 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| HX738_RS05190 (HX738_05190) | thiE | 1010564..1011196 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| HX738_RS05195 (HX738_05195) | thiD | 1011186..1011998 (-) | 813 | WP_002899485.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| HX738_RS05200 (HX738_05200) | - | 1011995..1012681 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| HX738_RS05205 (HX738_05205) | - | 1012678..1013439 (-) | 762 | WP_177640541.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=463566 HX738_RS05170 WP_002853046.1 1008550..1008852(+) (ctsT) [Campylobacter jejuni strain A9a]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=463566 HX738_RS05170 WP_002853046.1 1008550..1008852(+) (ctsT) [Campylobacter jejuni strain A9a]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |