Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   CQZ96_RS17300 Genome accession   NZ_CP058272
Coordinates   3686440..3690966 (+) Length   1508 a.a.
NCBI ID   WP_105714353.1    Uniprot ID   -
Organism   Acinetobacter sp. MYb10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3681440..3695966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CQZ96_RS17275 (CQZ96_017305) - 3681939..3682580 (-) 642 WP_105714355.1 hypothetical protein -
  CQZ96_RS17280 (CQZ96_017310) pilG 3682865..3683248 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  CQZ96_RS17285 (CQZ96_017315) - 3683274..3683642 (+) 369 WP_004723801.1 response regulator -
  CQZ96_RS17290 (CQZ96_017320) - 3683646..3684182 (+) 537 WP_004723799.1 chemotaxis protein CheW -
  CQZ96_RS17295 (CQZ96_017325) - 3684225..3686294 (+) 2070 WP_105714354.1 methyl-accepting chemotaxis protein -
  CQZ96_RS17300 (CQZ96_017330) chpA 3686440..3690966 (+) 4527 WP_105714353.1 Hpt domain-containing protein Regulator
  CQZ96_RS17305 (CQZ96_017335) - 3690975..3691439 (+) 465 WP_105714352.1 hypothetical protein -
  CQZ96_RS17310 (CQZ96_017340) dapE 3691516..3692649 (-) 1134 WP_004723792.1 succinyl-diaminopimelate desuccinylase -
  CQZ96_RS17315 (CQZ96_017345) - 3692806..3692946 (-) 141 WP_004723791.1 entericidin A/B family lipoprotein -
  CQZ96_RS17320 (CQZ96_017350) - 3693062..3693907 (-) 846 WP_105714351.1 DUF1853 family protein -
  CQZ96_RS17325 (CQZ96_017355) - 3694134..3694532 (+) 399 WP_004723787.1 YbaN family protein -

Sequence


Protein


Download         Length: 1508 a.a.        Molecular weight: 170391.58 Da        Isoelectric Point: 4.4364

>NTDB_id=463377 CQZ96_RS17300 WP_105714353.1 3686440..3690966(+) (chpA) [Acinetobacter sp. MYb10]
MKEILKHLVEQVTLPEDAYLGQDEEILEIFVEELEEIFEQLQTSLDRWQLEEFKDTELVNIRRYFHTLKGSGRMVGAKRS
GELAWTVEDTLNRIITKNLELTSEIQHYVSAVFNIYKFKLYSEFLNRKPHHLDLAPLVYLGQQLQQKQSLEPALDELLAL
SNTLDNENVITGLEIGEDNTTAEVTSVTTPHVVDLVADGSTDTTEEEVAVESTVADDSLTSETLEIFVEESEEHLAAIKD
FLHLEEHTPDQYNRLIRALHTLRGSSSMAHVNEVFEASGKVEHLFKVLVQEDTESSKNENALLTYYAEFVSDYLYVLKLK
GNQAVELQTIYQKFNDAWERYDFQHQYQHSQTGLVTQLVDLEIDLLLDAEFEFDKRAQVEYPAYFQQLAQQAQMLIDHTN
NRAAQGIHDFSLALKDGYEQVIRKPDLLNTDYAFEMFSKAHQEFIHLFDTLASGQRVSLNESTQAILAELHDYLHQEIDT
GVAGQIVETRIALDTEQQPGTVSIAANPVESVGNYVLTQINLDKQNIESEHSQREFDADVLDIFIEEADELLVGMDHDLN
TWSIHPDDTTALNNLMRYLHTLKGGANMVQATHIGLIAHELETIYERVIKGQLKAEPHIIQAIRLIQDDVADRIQLIREK
TIDYPATHILNVLHNIDQQDPIETVQAPTVVEPQFSHDSADLHEVAYVEDDIVLAIDQTPELLETEPSDQDQQPAIDATQ
LFIDANQDAGLDPVEVVARETFIEEARELIDDGLSILSQWFDQRSNRSFLLQLQRIAHSLKGGAKMVKLEEVADIAYELE
NAFEQFGLHNFNSNVYDGLLEKTFHWLDAAIFKHHYDNFEGLKSSLHGIEYVDVSAQLPEKLSRTNLIFEQSISEFVQGD
GTEPPSMLGEWDLSQKTESNNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLTDMELAIQRLADQLRRMEGEL
ESQIIAKHGDLSARYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRL
VPFSRLLPRLQRLVRQTSSTVNKPTELLVNNTEGELDRNILEKLVSPLEHMLRNAIDHGIEDAEQRQKSGKALTGRIDLN
ISRQGTDVLVSFKDDGKGIDPKVIRDKAIEKGLIKTDQQLEPEEILQFIFHPGFSTAQQVTQISGRGVGLDVVQSEIKSL
GGQVSVSSELGHGSTFTITVPTTVAVSDALMVKVGDQQFAVPLSQIDRIVRISPAALEEYFETQNDYFDIDFQSYKLRYL
GEFTSNQVTPRLHGLAHSLPVLLIKGSLGQSIAILVDQLIGSRSQIVVKPIGKQFATINAIAGATILGDGQVCLILDGQN
IARQVQASTRGGAEHLQHDKQRHRDQRRLIMIVDDSVTVRKVTSRLLERQGFDVITAKDGVDAIEQLENVKPDLMLLDIE
MPRMDGFEVTNLVRHHEIHRDLPIIMITSRTGEKHRERAFSLGVTNYMGKPFQEADLLENIEALLTVK

Nucleotide


Download         Length: 4527 bp        

>NTDB_id=463377 CQZ96_RS17300 WP_105714353.1 3686440..3690966(+) (chpA) [Acinetobacter sp. MYb10]
ATGAAAGAAATATTAAAACATTTAGTGGAACAAGTTACTTTACCTGAAGATGCGTATCTTGGTCAGGATGAGGAAATTTT
AGAAATTTTTGTAGAAGAACTTGAAGAAATTTTTGAACAGCTACAAACCTCTCTTGATCGATGGCAACTCGAAGAGTTTA
AAGATACCGAATTGGTCAATATTCGCCGTTATTTTCATACGCTTAAGGGGTCTGGGCGTATGGTGGGGGCTAAACGTTCT
GGTGAACTTGCTTGGACTGTTGAAGATACATTAAATCGTATTATTACGAAAAATCTGGAACTTACTTCCGAGATTCAACA
CTATGTAAGCGCAGTATTTAATATTTATAAATTCAAACTCTACTCAGAGTTTTTAAATCGAAAACCGCATCATTTAGATT
TAGCACCTTTGGTGTATTTGGGGCAACAGCTACAACAGAAACAAAGCTTAGAACCTGCTTTAGATGAGTTATTGGCATTA
TCAAATACACTGGATAATGAAAATGTCATTACTGGTTTGGAGATTGGTGAAGATAATACAACAGCAGAAGTAACCTCAGT
GACCACTCCGCATGTGGTTGATCTCGTTGCAGATGGCTCTACAGATACGACTGAAGAAGAAGTGGCAGTTGAATCGACTG
TTGCAGATGATAGTTTAACCTCTGAAACCTTGGAAATCTTTGTTGAAGAGTCAGAGGAGCATCTGGCGGCAATTAAAGAC
TTTTTGCACTTAGAAGAACATACGCCTGATCAATATAATCGCTTGATTCGTGCCTTGCATACTTTGCGTGGCAGTTCTTC
AATGGCGCATGTCAATGAGGTCTTTGAAGCAAGTGGTAAGGTCGAGCATTTATTTAAAGTATTGGTTCAAGAAGATACCG
AGTCCTCAAAAAATGAAAATGCGCTACTGACTTACTATGCTGAATTTGTCAGTGATTATCTCTATGTTTTAAAGCTGAAA
GGTAATCAAGCTGTTGAGCTACAAACCATTTATCAAAAATTTAATGATGCTTGGGAACGCTACGATTTCCAACATCAATA
TCAACATTCGCAAACGGGTTTAGTCACACAATTGGTTGATCTTGAGATCGATCTATTGCTTGATGCCGAGTTTGAGTTTG
ATAAGCGTGCCCAAGTTGAATATCCAGCATATTTCCAACAACTGGCTCAACAAGCGCAGATGTTGATAGATCATACCAAT
AATCGTGCTGCACAAGGCATTCATGATTTTAGTCTTGCTTTAAAAGATGGTTATGAACAAGTTATTCGCAAGCCTGATTT
ATTAAATACTGATTATGCTTTTGAAATGTTTTCTAAGGCCCATCAGGAATTTATTCATTTATTCGATACTTTGGCATCAG
GACAAAGAGTCAGCCTAAATGAATCAACACAAGCGATTTTGGCTGAGTTACATGACTATTTACACCAAGAAATAGACACT
GGTGTTGCTGGTCAAATTGTTGAAACAAGGATTGCGCTAGACACTGAACAGCAGCCAGGTACAGTCTCAATTGCAGCGAA
CCCTGTTGAATCAGTAGGGAACTATGTACTGACGCAAATTAATCTGGATAAACAGAATATTGAATCAGAACATAGTCAAC
GTGAATTTGATGCTGATGTCCTCGACATTTTTATTGAAGAGGCTGACGAGTTGTTGGTTGGGATGGACCATGACTTAAAT
ACTTGGTCAATTCATCCTGATGACACAACAGCACTAAACAATTTGATGCGTTATTTGCATACCTTAAAAGGTGGTGCAAA
TATGGTGCAAGCGACCCATATTGGTTTGATTGCGCATGAGTTAGAAACCATTTATGAACGCGTGATTAAAGGTCAACTCA
AAGCAGAACCACACATTATTCAAGCAATTCGTTTAATTCAAGATGATGTGGCAGATCGCATTCAATTGATTCGTGAAAAA
ACAATTGATTATCCTGCAACTCATATTCTCAATGTTTTACACAATATCGATCAGCAAGATCCGATTGAAACTGTTCAAGC
GCCAACAGTGGTTGAACCACAATTTAGCCATGATTCAGCAGATTTACATGAAGTCGCATATGTTGAAGACGATATCGTTT
TAGCGATTGATCAAACTCCAGAATTGCTTGAAACTGAACCCTCGGATCAAGATCAACAACCTGCAATTGATGCTACTCAA
TTGTTTATAGATGCAAATCAAGATGCAGGTTTAGATCCTGTTGAAGTTGTTGCCCGAGAAACCTTTATCGAAGAAGCAAG
AGAGCTGATTGATGATGGTTTAAGCATTTTATCTCAATGGTTTGATCAGCGTAGCAACCGTAGCTTCCTACTCCAATTAC
AACGTATTGCACACAGCTTAAAAGGCGGTGCAAAAATGGTGAAATTGGAAGAAGTTGCTGATATTGCATATGAATTAGAA
AATGCATTTGAGCAATTTGGTTTACATAATTTTAACTCGAATGTTTATGATGGTTTACTGGAAAAAACCTTTCATTGGCT
AGATGCAGCAATCTTTAAACATCACTACGATAACTTTGAAGGCTTAAAGTCGAGTTTACATGGCATTGAATATGTTGATG
TTTCTGCACAGCTTCCAGAAAAATTATCTCGAACAAATTTAATCTTTGAGCAATCGATCAGTGAGTTTGTTCAGGGGGAT
GGTACTGAGCCACCGTCAATGCTGGGTGAATGGGATCTTTCACAAAAAACTGAATCCAACAATGAGATGATTCGTATCTC
TGCGGATTTGGTTGAAAAAATGATTGACCTTTCTGGTGAAAACGCGATCAACCGTTCACGTATTGAGATGGATTTGGGGC
AGTTAGGGAATACCTTGACTGATATGGAGTTGGCTATTCAACGTTTGGCTGATCAGCTACGCCGTATGGAAGGTGAGTTA
GAAAGCCAAATTATTGCAAAACATGGTGATTTAAGCGCTCGCTATGCAGATTTTGACCCTTTAGAAATGGACCAATATTC
ATCTCTAAACCAGTTATCAAAATCGTTGGCTGAATCTGCATCTGACTTGGTTGATTTTAAGACCACGTTGGCTGAAAAGA
TTCGTGATACTGAAGGTTTATTGCTTCAGCAATCTCGTATTCAAGCTGAAATTCAGGAAAGCTTGATGCGTACTCGTCTG
GTACCATTCTCAAGATTGTTGCCTCGATTACAGCGTTTGGTTCGTCAGACCTCTTCAACCGTGAATAAACCCACTGAGCT
TTTAGTCAATAATACTGAAGGGGAGTTGGATCGTAATATTCTGGAAAAATTAGTTTCACCGTTAGAGCATATGTTGCGTA
ATGCGATTGACCACGGGATTGAAGATGCGGAACAGCGTCAGAAGTCGGGCAAAGCGTTGACAGGTCGAATTGATTTGAAT
ATTAGTCGTCAAGGTACAGATGTGCTTGTATCGTTTAAAGATGATGGTAAAGGAATTGATCCAAAAGTTATTCGTGATAA
AGCAATCGAAAAAGGCTTAATCAAAACTGATCAGCAGTTAGAGCCTGAGGAAATCCTACAGTTTATTTTCCATCCAGGTT
TTAGTACAGCACAGCAAGTGACACAAATCTCTGGTCGTGGTGTTGGCTTGGATGTTGTGCAAAGTGAAATTAAATCACTT
GGTGGACAAGTGAGTGTCAGTTCTGAGTTGGGGCATGGTTCAACCTTTACGATTACCGTACCTACAACAGTTGCGGTCAG
CGATGCCTTGATGGTGAAAGTCGGTGATCAGCAATTTGCAGTCCCATTATCGCAAATTGATCGTATTGTTCGAATTTCAC
CAGCCGCTTTGGAAGAATATTTTGAAACTCAAAATGACTATTTTGATATCGATTTCCAAAGCTATAAGCTACGTTATTTA
GGTGAGTTTACCTCGAATCAAGTCACTCCACGGTTACATGGGCTTGCACATTCATTACCAGTGTTGTTGATCAAGGGAAG
CTTGGGGCAATCCATTGCCATTCTGGTTGATCAGTTAATTGGTTCACGTTCACAAATTGTAGTTAAACCGATTGGTAAGC
AGTTTGCTACCATCAATGCGATTGCGGGTGCAACCATTCTGGGTGATGGTCAGGTGTGTTTGATTTTGGATGGACAAAAT
ATTGCACGACAAGTTCAAGCATCTACCCGAGGTGGCGCTGAACATCTTCAACATGATAAACAACGTCATCGTGATCAACG
CCGTTTGATTATGATCGTGGATGATTCAGTTACCGTTCGTAAGGTCACTTCACGTTTGCTTGAACGCCAAGGTTTCGATG
TGATTACTGCGAAAGATGGTGTGGATGCGATTGAGCAACTTGAAAATGTCAAACCAGACTTGATGTTGCTGGATATTGAA
ATGCCTCGAATGGATGGTTTTGAAGTCACCAACTTGGTTCGCCATCATGAAATTCACCGCGATTTGCCAATCATCATGAT
TACGTCACGAACAGGTGAAAAACATCGTGAACGGGCATTTAGCTTAGGTGTGACAAATTATATGGGTAAACCATTCCAAG
AAGCTGATTTATTGGAAAATATTGAAGCTTTGTTGACGGTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.043

100

0.597