Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   HW271_RS07125 Genome accession   NZ_CP058258
Coordinates   1452525..1453574 (-) Length   349 a.a.
NCBI ID   WP_178895429.1    Uniprot ID   A0A7H8ZB14
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1447525..1458574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS07095 (HW271_07095) - 1448660..1448959 (-) 300 WP_178895425.1 YlxQ-related RNA-binding protein -
  HW271_RS07100 (HW271_07100) rnpM 1448952..1449245 (-) 294 WP_006144965.1 RNase P modulator RnpM -
  HW271_RS07105 (HW271_07105) nusA 1449267..1450403 (-) 1137 WP_178895426.1 transcription termination factor NusA -
  HW271_RS07110 (HW271_07110) rimP 1450445..1450924 (-) 480 WP_004251813.1 ribosome maturation factor RimP -
  HW271_RS07115 (HW271_07115) trmB 1451051..1451686 (-) 636 WP_178895427.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HW271_RS07120 (HW271_07120) ccrZ 1451683..1452477 (-) 795 WP_178895428.1 cell cycle regulator CcrZ -
  HW271_RS07125 (HW271_07125) pptB 1452525..1453574 (-) 1050 WP_178895429.1 ABC transporter permease Regulator
  HW271_RS07130 (HW271_07130) pptA 1453571..1454302 (-) 732 WP_178895430.1 ABC transporter ATP-binding protein Regulator
  HW271_RS07135 (HW271_07135) - 1454370..1454780 (+) 411 WP_178895431.1 HIT family protein -
  HW271_RS07140 (HW271_07140) - 1454790..1455077 (+) 288 WP_178895432.1 hypothetical protein -
  HW271_RS07145 (HW271_07145) - 1455163..1455804 (+) 642 WP_178895433.1 hypothetical protein -
  HW271_RS07150 (HW271_07150) dnaJ 1455881..1457017 (-) 1137 WP_178895434.1 molecular chaperone DnaJ -
  HW271_RS07155 (HW271_07155) - 1457400..1458032 (-) 633 WP_178895435.1 DJ-1/PfpI family protein -

Sequence

Protein


Download         Length: 349 a.a.        Molecular weight: 40551.75 Da        Isoelectric Point: 9.9733

>NTDB_id=463238 HW271_RS07125 WP_178895429.1 1452525..1453574(-) (pptB) [Streptococcus sp. oral taxon 061 strain F0704]
MKDLFLKRKQEFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYNQLLQHFPENHFPILILIGMISILLLLWGGIATYLEV
PDKLFLLVAEEEVREHIQKQSLISFIFWVSVQTLFLLLFAPLFLAMGLGLPFFGVYLLVLGIVKYVIFRQKSSNFFLGNG
LDWDFAIAQESKRKQFLLRFFALFTQVKGISNSVKRRAYLDFILKGVQKVPGKIWQNLYLRSYLRNGDLFALSLRLIILS
LTALIFIEQSWIAVAIVILFNYLLLFQLLALYHAFDYQYLTQLFPVGKGQKEKGLKEILRAIGIFALALESLLGLLVFKD
KILVLVLVGAGLVLQYLYLPYQLRRLVDE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=463238 HW271_RS07125 WP_178895429.1 1452525..1453574(-) (pptB) [Streptococcus sp. oral taxon 061 strain F0704]
ATGAAGGACTTGTTTTTAAAACGAAAGCAGGAATTTCGCAAGGAATGCTTGGGCTATCTCCGTTATGTGCTCAATGACCA
TTTTGTCTTATTTTTGTTGGTGTTGTTAGGATTTTTGGCCTACCAGTACAACCAGTTGCTCCAACACTTTCCTGAGAATC
ATTTCCCAATCCTAATTTTGATTGGGATGATATCTATTTTACTTTTGCTTTGGGGTGGTATTGCGACCTATCTAGAAGTG
CCTGACAAACTATTTCTTTTAGTTGCTGAAGAAGAAGTGAGAGAACACATCCAGAAGCAGAGTCTGATTTCTTTCATCTT
TTGGGTCAGTGTACAGACTCTCTTTTTGCTCCTGTTTGCGCCTTTATTCTTAGCCATGGGTCTTGGTTTGCCGTTTTTTG
GAGTCTATCTCCTTGTCTTGGGGATAGTAAAATATGTGATTTTTCGCCAAAAGTCTAGCAACTTTTTCCTTGGAAATGGA
CTTGACTGGGATTTTGCCATTGCCCAGGAAAGCAAACGCAAGCAGTTCTTGCTTCGGTTTTTTGCCCTCTTTACCCAGGT
TAAGGGAATTTCAAACAGTGTTAAACGTCGAGCTTACCTGGACTTTATCCTCAAGGGCGTTCAGAAAGTACCAGGGAAAA
TCTGGCAGAATCTTTATCTCCGCTCCTATCTTAGAAATGGAGATTTATTCGCCCTTAGTCTGCGACTCATAATCCTATCT
TTGACCGCTCTCATCTTCATTGAGCAATCTTGGATTGCGGTAGCAATTGTAATTTTATTCAATTATCTTTTGTTATTCCA
GCTTCTAGCCCTCTATCATGCCTTTGACTATCAATATTTAACGCAATTATTCCCAGTAGGTAAGGGGCAAAAAGAGAAAG
GCTTGAAGGAAATCTTGAGAGCGATTGGGATCTTTGCCTTAGCCTTGGAAAGTCTTTTAGGATTGCTTGTTTTCAAGGAC
AAAATTCTAGTTTTAGTCCTTGTGGGAGCAGGCCTTGTATTGCAATATCTTTATTTGCCATATCAACTGAGAAGATTGGT
TGACGAATAG

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-157)

Bacterial ABC transporter protein EcsB (EcsB)

(159-331)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8ZB14

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

48.857

100

0.49
  pptB Streptococcus thermophilus LMD-9

47.714

100

0.479