Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SAOV_RS01495 | Genome accession | NC_017337 |
| Coordinates | 328806..329225 (+) | Length | 139 a.a. |
| NCBI ID | WP_000934796.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus subsp. aureus ED133 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 323806..334225
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAOV_RS01435 (SAOV_0278) | - | 324038..324499 (-) | 462 | WP_000524999.1 | ImmA/IrrE family metallo-endopeptidase | - |
| SAOV_RS01440 (SAOV_0279) | - | 324512..324841 (-) | 330 | WP_000429766.1 | helix-turn-helix domain-containing protein | - |
| SAOV_RS01445 (SAOV_0280) | - | 325002..325193 (+) | 192 | WP_001115060.1 | helix-turn-helix transcriptional regulator | - |
| SAOV_RS15410 (SAOV_0281) | - | 325281..325457 (+) | 177 | WP_001001356.1 | hypothetical protein | - |
| SAOV_RS01450 (SAOV_0282) | - | 325454..325684 (-) | 231 | WP_000549547.1 | hypothetical protein | - |
| SAOV_RS01455 (SAOV_0283) | - | 325741..326493 (+) | 753 | WP_001148596.1 | phage antirepressor KilAC domain-containing protein | - |
| SAOV_RS01460 (SAOV_0284) | - | 326509..326706 (+) | 198 | WP_001202628.1 | hypothetical protein | - |
| SAOV_RS15525 | - | 326718..326849 (+) | 132 | Protein_285 | MW1434 family type I TA system toxin | - |
| SAOV_RS01465 (SAOV_0285) | - | 326852..327115 (+) | 264 | WP_001124184.1 | helix-turn-helix domain-containing protein | - |
| SAOV_RS01470 | - | 327128..327289 (+) | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| SAOV_RS01475 (SAOV_0286) | - | 327392..327694 (+) | 303 | WP_000165372.1 | DUF2482 family protein | - |
| SAOV_RS01480 (SAOV_0287) | - | 327699..327959 (+) | 261 | WP_000291499.1 | DUF1108 family protein | - |
| SAOV_RS01485 (SAOV_0288) | - | 327969..328190 (+) | 222 | WP_000815403.1 | DUF2483 family protein | - |
| SAOV_RS01490 (SAOV_0289) | - | 328183..328806 (+) | 624 | WP_000139727.1 | DUF1071 domain-containing protein | - |
| SAOV_RS01495 (SAOV_0290) | ssbA | 328806..329225 (+) | 420 | WP_000934796.1 | single-stranded DNA-binding protein | Machinery gene |
| SAOV_RS01500 (SAOV_0291) | - | 329239..329934 (+) | 696 | WP_001124448.1 | putative HNHc nuclease | - |
| SAOV_RS01505 (SAOV_0292) | - | 329906..330706 (+) | 801 | WP_000504977.1 | phage replisome organizer N-terminal domain-containing protein | - |
| SAOV_RS01510 (SAOV_0293) | - | 330706..331062 (+) | 357 | WP_001132243.1 | hypothetical protein | - |
| SAOV_RS01515 (SAOV_0294) | - | 331059..332300 (+) | 1242 | WP_001106163.1 | DnaB helicase C-terminal domain-containing protein | - |
| SAOV_RS01520 (SAOV_0295) | - | 332297..332512 (+) | 216 | WP_001024401.1 | hypothetical protein | - |
| SAOV_RS01525 (SAOV_0296) | - | 332515..332736 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| SAOV_RS01530 (SAOV_0297) | - | 332746..333153 (+) | 408 | WP_000401951.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SAOV_RS01535 (SAOV_0298) | - | 333153..333338 (+) | 186 | WP_001187271.1 | DUF3113 family protein | - |
| SAOV_RS01540 (SAOV_0299) | - | 333339..333607 (+) | 269 | Protein_301 | helix-turn-helix domain-containing protein | - |
| SAOV_RS01545 (SAOV_0300) | - | 333608..333979 (+) | 372 | WP_001140276.1 | SA1788 family PVL leukocidin-associated protein | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15606.24 Da Isoelectric Point: 7.0171
>NTDB_id=46275 SAOV_RS01495 WP_000934796.1 328806..329225(+) (ssbA) [Staphylococcus aureus subsp. aureus ED133]
MLNRVVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYDNKEGRRVFVTEVVADSVQFLEPKNNNKQNNQQHNGQTQTGNNPFDNTEEDFSDLPF
MLNRVVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYDNKEGRRVFVTEVVADSVQFLEPKNNNKQNNQQHNGQTQTGNNPFDNTEEDFSDLPF
Nucleotide
Download Length: 420 bp
>NTDB_id=46275 SAOV_RS01495 WP_000934796.1 328806..329225(+) (ssbA) [Staphylococcus aureus subsp. aureus ED133]
ATGTTAAACAGAGTAGTTTTAGTAGGACGATTAACAAAAGACCCAGAATTAAGAAGTACACCAAATGGCGTAAATGTAGG
GACATTCACATTAGCAGTAAACAGAACATTTACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAAGGATCGTTGGCAGGTGTAGACGGACGACTACAAACACGC
AGTTACGATAACAAAGAAGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACAAACAGAATAACCAACAACACAACGGACAAACTCAAACTGGTAATAATCCGTTCGACAATACCGAAGAAGACT
TTTCTGACTTACCGTTCTGA
ATGTTAAACAGAGTAGTTTTAGTAGGACGATTAACAAAAGACCCAGAATTAAGAAGTACACCAAATGGCGTAAATGTAGG
GACATTCACATTAGCAGTAAACAGAACATTTACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAAGGATCGTTGGCAGGTGTAGACGGACGACTACAAACACGC
AGTTACGATAACAAAGAAGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACAAACAGAATAACCAACAACACAACGGACAAACTCAAACTGGTAATAATCCGTTCGACAATACCGAAGAAGACT
TTTCTGACTTACCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
80.374 |
76.978 |
0.619 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.947 |
100 |
0.59 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.091 |
79.137 |
0.468 |
| ssbB/cilA | Streptococcus mitis SK321 |
40.288 |
100 |
0.403 |
| ssbA | Streptococcus mutans UA159 |
45.378 |
85.612 |
0.388 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
49.057 |
76.259 |
0.374 |