Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | LILO_RS01640 | Genome accession | NC_020450 |
| Coordinates | 326064..326660 (+) | Length | 198 a.a. |
| NCBI ID | WP_003131648.1 | Uniprot ID | Q9CIL6 |
| Organism | Lactococcus lactis subsp. lactis IO-1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 321064..331660
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LILO_RS01625 (lilo_0304) | ahpC | 321437..322000 (+) | 564 | WP_015425800.1 | alkyl hydroperoxide reductase subunit C | - |
| LILO_RS01630 (lilo_0305) | ahpF | 322065..323594 (+) | 1530 | WP_042230689.1 | alkyl hydroperoxide reductase subunit F | - |
| LILO_RS01635 (lilo_0306) | - | 323760..325925 (+) | 2166 | WP_015425802.1 | penicillin-binding transpeptidase domain-containing protein | - |
| LILO_RS01640 (lilo_0307) | recR | 326064..326660 (+) | 597 | WP_003131648.1 | recombination mediator RecR | Machinery gene |
| LILO_RS01645 (lilo_0308) | - | 326777..327826 (+) | 1050 | WP_042230059.1 | D-alanine--D-alanine ligase | - |
| LILO_RS01650 (lilo_0309) | - | 327901..329223 (+) | 1323 | WP_015425804.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| LILO_RS01655 (lilo_0310) | - | 329392..331044 (+) | 1653 | WP_015425805.1 | peptide ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21909.22 Da Isoelectric Point: 4.8226
>NTDB_id=46061 LILO_RS01640 WP_003131648.1 326064..326660(+) (recR) [Lactococcus lactis subsp. lactis IO-1]
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
Nucleotide
Download Length: 597 bp
>NTDB_id=46061 LILO_RS01640 WP_003131648.1 326064..326660(+) (recR) [Lactococcus lactis subsp. lactis IO-1]
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTGTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGCGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGATCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGCACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATCATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGGTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTGTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGCGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGATCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGCACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATCATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGGTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
78.283 |
100 |
0.783 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
59.596 |
100 |
0.596 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |