Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   I6J13_RS08645 Genome accession   NZ_CP068213
Coordinates   1750680..1751726 (+) Length   348 a.a.
NCBI ID   WP_006269357.1    Uniprot ID   A0A380L5T7
Organism   Streptococcus constellatus strain FDAARGOS_1156     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1745680..1756726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J13_RS08615 (I6J13_08615) tsaE 1747052..1747492 (+) 441 WP_006269361.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6J13_RS08620 (I6J13_08620) - 1747485..1748006 (+) 522 WP_006269358.1 GNAT family N-acetyltransferase -
  I6J13_RS08625 (I6J13_08625) brpA 1748014..1749129 (+) 1116 WP_006269345.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6J13_RS08630 (I6J13_08630) - 1749176..1749463 (-) 288 WP_006269352.1 hypothetical protein -
  I6J13_RS08635 (I6J13_08635) - 1749473..1749883 (-) 411 WP_006269359.1 HIT family protein -
  I6J13_RS08640 (I6J13_08640) pptA 1749952..1750683 (+) 732 WP_006269366.1 ABC transporter ATP-binding protein Regulator
  I6J13_RS08645 (I6J13_08645) pptB 1750680..1751726 (+) 1047 WP_006269357.1 ABC transporter permease Regulator
  I6J13_RS08650 (I6J13_08650) ccrZ 1751777..1752574 (+) 798 WP_006269344.1 cell cycle regulator CcrZ -
  I6J13_RS08655 (I6J13_08655) trmB 1752571..1753206 (+) 636 WP_003078354.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6J13_RS08660 (I6J13_08660) - 1753373..1754899 (-) 1527 WP_115342906.1 IS1182 family transposase -
  I6J13_RS09565 - 1754860..1755041 (+) 182 Protein_1684 hypothetical protein -
  I6J13_RS08665 (I6J13_08665) - 1755304..1755996 (+) 693 WP_003073834.1 VIT family protein -
  I6J13_RS08670 (I6J13_08670) rimP 1756208..1756696 (+) 489 WP_006269953.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 40798.21 Da        Isoelectric Point: 10.3580

>NTDB_id=459176 I6J13_RS08645 WP_006269357.1 1750680..1751726(+) (pptB) [Streptococcus constellatus strain FDAARGOS_1156]
MKEVFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNHLPIILALAVLLVFLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQKQMCSSYLLWSVFQTAILLLAAPLLLALGLPFWGWFILVFFMLIAKWFLFLKKSQRFYQGVG
INWSYLIDYEERRKQTILRFFALFTNVKGISNSVKRRAYLDSLTTILPKRQSTTWQNMFLRSYLRNGDFLALTMRLLFLS
LLGIGLLGQSWIAAVFVILLNYLLLFQLTALYNAFDYQYLTFLFPLEIGLKLKGVRQVIVLVGYSVLLVETIMALLFFQD
RVALLFMAGVTLLLYFLYLPVKLKSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=459176 I6J13_RS08645 WP_006269357.1 1750680..1751726(+) (pptB) [Streptococcus constellatus strain FDAARGOS_1156]
ATGAAAGAAGTGTTTCAAAAGCGCAAGCAAGTATTTCGCAATCAATGTTTGAAATATTCACGCTATGTTTTTAACGACCA
TTTTGTTCTATTTTTATTAGTTTTTATTGGCTTTTTAGCTGTTCAATATAGTCAACTGTTGCGAAATTTTCCTAAAAATC
ACCTGCCAATTATTCTTGCTTTAGCAGTTCTTTTGGTGTTCTTGTTGCCTTTGGGAAGAATTGCAACGTATATGGAAAAG
CCAGATAGTCTATTTTTGTTGGTCAAAGAAGAAGAATTAAAAAGTTATTTACAAAAACAAATGTGTTCATCTTATTTATT
ATGGAGTGTATTTCAAACGGCTATTCTATTACTAGCAGCGCCACTCCTTTTGGCGCTAGGATTACCATTTTGGGGATGGT
TTATTCTTGTATTTTTTATGTTAATAGCAAAATGGTTTCTATTTTTGAAAAAGAGCCAAAGATTTTATCAAGGTGTAGGC
ATAAATTGGAGCTATCTCATTGACTACGAGGAGAGACGAAAGCAGACAATCTTGCGTTTCTTTGCTCTCTTTACCAATGT
AAAAGGAATCTCCAATAGCGTGAAACGCCGAGCCTATCTTGATAGTTTGACAACTATTTTGCCAAAAAGGCAATCAACAA
CCTGGCAGAATATGTTTTTACGCTCTTATTTGCGAAATGGTGATTTTCTGGCTTTGACCATGCGGTTGCTATTTCTATCT
CTTTTAGGAATTGGCTTGCTCGGTCAATCTTGGATTGCGGCTGTTTTTGTGATACTGTTGAATTATCTTTTGCTATTTCA
ATTGACCGCTTTGTACAATGCTTTTGATTATCAATATTTGACATTCTTATTTCCTCTAGAAATCGGATTAAAGTTAAAGG
GTGTGAGACAAGTGATTGTTCTTGTTGGTTACAGTGTGCTGTTAGTTGAAACAATTATGGCGTTGCTATTTTTCCAAGAT
AGAGTTGCATTGCTTTTCATGGCAGGAGTTACACTATTGCTTTATTTTCTCTATTTACCAGTTAAATTAAAAAGTTTGGT
TGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-157)

Bacterial ABC transporter protein EcsB (EcsB)

(159-327)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380L5T7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

47.414

100

0.474
  pptB Streptococcus salivarius strain HSISS4

46.264

100

0.463