Detailed information NTG0459157

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6J13_RS06975
• Genome accession: NZ_CP068213
• Coordinates: 1426855..1427952 (+)
• Length: 365 a.a.
• NCBI ID: WP_006270355.1
• Uniprot ID: -
• Organism: Streptococcus constellatus strain FDAARGOS_1156
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1421855..1432952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J13_RS06950 (I6J13_06950)	pgsA	1422325..1422864 (-)	540	WP_006270330.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
I6J13_RS06955 (I6J13_06955)	rodZ	1422875..1423696 (-)	822	WP_003071635.1	cytoskeleton protein RodZ	-
I6J13_RS06960 (I6J13_06960)	yfmH	1423755..1425050 (-)	1296	WP_003071636.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6J13_RS06965 (I6J13_06965)	yfmF	1425050..1426297 (-)	1248	WP_006270362.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6J13_RS06970 (I6J13_06970)	yaaA	1426472..1426852 (+)	381	WP_003071640.1	S4 domain-containing protein YaaA	-
I6J13_RS06975 (I6J13_06975)	recF	1426855..1427952 (+)	1098	WP_006270355.1	DNA replication/repair protein RecF	Machinery gene
I6J13_RS06980 (I6J13_06980)	guaB	1428041..1429522 (-)	1482	WP_006270353.1	IMP dehydrogenase	-
I6J13_RS06985 (I6J13_06985)	trpS	1429660..1430685 (-)	1026	WP_006270346.1	tryptophan--tRNA ligase	-
I6J13_RS06990 (I6J13_06990)	galE	1430767..1431762 (-)	996	WP_006270326.1	UDP-glucose 4-epimerase GalE	-
I6J13_RS06995 (I6J13_06995)	-	1431782..1432471 (-)	690	WP_006270324.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42287.69 Da
• Isoelectric Point: 8.4346

>NTDB_id=459157 I6J13_RS06975 WP_006270355.1 1426855..1427952(+) (recF) [Streptococcus constellatus strain FDAARGOS_1156]
MWLKNLQIQHFRNYELTEIDFHPGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKVSGQLVKQTGK
ISLEIDLTPKGRITKVNHLKQSKLSDYIGNMNIVLFAPEDLQLIKGAPTLRRKFVDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTIDETFLTVLDDQLVEFGCRIMQHRIEFLKKLEYFGQQKHLELSNNLENLTIKYCSSIRLSDFNKLEEAFRI
ALKQSRSRDLFKKTTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNNRQ
LNLLESISQNIQTFITTTTLEHLQNMPSDIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=459157 I6J13_RS06975 WP_006270355.1 1426855..1427952(+) (recF) [Streptococcus constellatus strain FDAARGOS_1156]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGCAATTACGAGCTAACTGAAATAGACTTTCATCCTGGACTCAACAT
TTTTCTAGGTCAAAATGCTCAAGGAAAAACAAATATTTTAGAAGCTATCTATTTTCTTGCATTGACACGGAGTCATCGAA
CTCGTTCAGATAAAGATTTAATTTATTTTTCTAAAGACACCTTAAAAGTATCTGGACAACTTGTCAAGCAAACTGGAAAG
ATTTCTTTAGAGATTGACTTGACACCAAAAGGAAGAATTACAAAGGTTAATCATCTAAAACAAAGCAAATTATCAGATTA
CATTGGAAATATGAATATTGTTTTGTTTGCTCCAGAAGATTTACAATTGATTAAAGGAGCTCCAACCCTTAGACGCAAAT
TTGTTGATATAGAGTTGGGGCAAATTAAACCAATTTATTTATCTGATTTATCACATTATCATCATGTTCTAAAACAGAGA
AATACTTATTTAAAGACAGCAAAAACAATAGATGAGACTTTTTTAACTGTCTTGGATGATCAGTTAGTAGAGTTTGGTTG
CCGCATTATGCAGCATCGAATAGAATTTCTCAAAAAATTAGAATACTTTGGTCAGCAAAAACATTTGGAACTCTCAAATA
ATTTAGAAAATTTAACTATTAAATACTGCTCTTCTATTCGACTTTCAGATTTCAATAAACTAGAAGAAGCTTTTCGAATT
GCATTAAAACAAAGTCGTAGCAGAGATTTATTTAAAAAAACTACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGATATGAATGCTAATTTTGGTAGTCAAGGACAACATCGAAGCGTAGTCTTATCTCTCAAACTGGCAGAAATTG
AGCTTATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTCATGAGTGAACTTGACAATAACCGTCAA
CTTAATCTACTTGAATCTATTTCCCAAAACATCCAAACATTTATCACCACAACAACTCTAGAACATTTACAAAACATGCC
TTCTGATATTAAAATTTTCTCAATTCATGAAGGACATTTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	71.229	98.082	0.699
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	95.342	0.438