Detailed information    

insolico Bioinformatically predicted

Overview


Name   rexA   Type   Machinery gene
Locus tag   I6J13_RS00800 Genome accession   NZ_CP068213
Coordinates   169034..172714 (+) Length   1226 a.a.
NCBI ID   WP_006269935.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1156     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 164034..177714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J13_RS00790 (I6J13_00790) - 164427..165641 (+) 1215 WP_006269939.1 ABC transporter permease -
  I6J13_RS00795 (I6J13_00795) rexB 165762..169037 (+) 3276 WP_006269918.1 ATP-dependent nuclease subunit B Machinery gene
  I6J13_RS00800 (I6J13_00800) rexA 169034..172714 (+) 3681 WP_006269935.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  I6J13_RS00805 (I6J13_00805) glgB 173184..175094 (+) 1911 WP_006269910.1 1,4-alpha-glucan branching protein GlgB -
  I6J13_RS00810 (I6J13_00810) - 175098..176240 (+) 1143 WP_006269944.1 glucose-1-phosphate adenylyltransferase -
  I6J13_RS00815 (I6J13_00815) glgD 176230..177369 (+) 1140 WP_003069762.1 glucose-1-phosphate adenylyltransferase subunit GlgD -

Sequence


Protein


Download         Length: 1226 a.a.        Molecular weight: 141385.25 Da        Isoelectric Point: 5.4898

>NTDB_id=459089 I6J13_RS00800 WP_006269935.1 169034..172714(+) (rexA) [Streptococcus constellatus strain FDAARGOS_1156]
MRQIPFLTQAEIRALQDQEVQSDKVQKCTPEQIEAIYSSGQNILVSASAGSGKTFVMVQRIIDQIMRGVRIEQLFISTFT
VKAASELKERLEKELSKALKETNDEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQSTSEQLLLQ
NEVFEQVFEDFYQSDQAALFKKLVKNFTGQRKDLLGFREQVYKIYSFLQSTSSPIEWLEKDFLKGYEFADFQEEKAQLLA
QTKEALFDLEDFFSYHLVHEAKEFSKAKYLENVQRVLDDLASLQGHSSEEAYLTTLNNIVEISRASNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQLTYHEEAKEILLVLQQFMKLFVTSYLNRKKEENAFEFADISHFAIQILE
ECSDVRQFYRNKYHEVMVDEYQDTNHTQERMLELLSNGGNRFMVGDIKQSIYRFRQADPQIFNEKFKLYQSDSQQGKLIV
LKENFRSHLEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPDKKEPNPLYQTEFLIYDGTLETDNEENDKDVSSVSAG
EVALVIKEIIRLHNEENVQFEDITLLTASRTRNDMILAEFAKYGIPIVSDGGEDNYLQSVEVMVMLDTLRTINNPLNDYA
LVALLKSPMFNFTEDELARLALQKKVTEANYVVHQENLYEKLKNALNGYGHYPELITPPLLKKIQQFQETLQAWREYAKT
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVVAAPKHAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDSSSALILSRQNGVGIKYVADVAVDVADKLAPNHVRLSINTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGHQKSLEKKGFPTPVKEHLAASIRQSMTSFQDWMWALHVVFEKDNLAFSTRFV
TDNDLTSEKIGQLKLKDAVIEEDLIDNRQSEDIRRALDILENVDRLNTKYQAAIHLPSVRTPSQIKKFYEPIMDTDGVEI
MEKRNPTIVGKASFELPNFAKKAPVTGAQIGSAVHELMQRIPLDQAPTIAILRKVLKQVQAEESVKKKIDLQKIASFFGT
ELGQLLLKHTDRVYREAPFAMLKQDPASGQYFVVRGILDGYLLLTDRIILFDYKTDRYTNPSELVERYQAQLALYAEALS
RSYSIEKVEKYLVLLGGAQLQVVKVE

Nucleotide


Download         Length: 3681 bp        

>NTDB_id=459089 I6J13_RS00800 WP_006269935.1 169034..172714(+) (rexA) [Streptococcus constellatus strain FDAARGOS_1156]
ATGAGACAAATTCCATTTTTGACTCAAGCAGAGATTCGTGCTTTGCAGGATCAGGAAGTTCAGTCTGACAAAGTTCAAAA
ATGTACACCAGAACAGATTGAAGCCATTTACTCTTCCGGACAAAATATTCTGGTTTCTGCTTCTGCGGGATCAGGAAAAA
CCTTTGTTATGGTGCAGCGGATTATTGACCAAATTATGCGGGGAGTTCGTATTGAGCAGCTCTTCATTTCAACTTTCACC
GTCAAAGCAGCTAGTGAATTAAAAGAGCGCTTGGAGAAAGAGCTGTCCAAGGCTTTGAAAGAAACAAATGATGAGGAATT
AAAACAACACTTGGCTCAGCAATTAGCCGATATTCCGAATGCAGATATTGGAACCATGGACTCTTTTACCCAAAAAGTCC
TGAATAAATATGGTTATTTGTTGGAGTTAGCACCAAATTTTCGCATTTTACAAAGTACGAGTGAACAATTATTGCTACAA
AACGAAGTTTTTGAGCAAGTTTTTGAAGACTTCTATCAATCTGATCAGGCTGCTTTGTTTAAAAAATTAGTCAAAAACTT
TACAGGTCAGAGAAAAGATTTGCTTGGTTTTCGAGAGCAAGTTTATAAGATTTATTCTTTTTTGCAGTCTACTAGTAGTC
CAATAGAATGGTTGGAAAAAGACTTTTTGAAAGGCTATGAGTTTGCAGATTTCCAAGAAGAAAAAGCGCAACTTTTAGCA
CAAACAAAAGAAGCCCTCTTTGATTTAGAAGATTTTTTTAGCTATCATTTGGTTCATGAAGCCAAGGAATTTTCCAAAGC
AAAATATCTTGAAAATGTGCAGCGTGTGCTTGATGACCTTGCAAGTTTACAAGGGCATTCCTCTGAGGAAGCCTATCTCA
CAACGCTCAATAACATTGTAGAAATATCGCGTGCCAGCAATGGAAAAGCCTTGACGAACAGCGGACGAAAAGAAGAATTA
AAAGAAATTATTAACGCCTATAACGAAAAACGCAAAGAAAAAATTCAAGTTTTACGAGACTTGGCAGATCAATTTTATCG
TTTTGAATTTCAATTGACCTACCATGAGGAAGCAAAAGAAATTTTACTTGTTTTGCAACAATTTATGAAATTGTTTGTTA
CAAGCTATTTGAATCGCAAAAAAGAAGAAAATGCTTTTGAATTTGCGGACATTAGTCATTTTGCTATTCAGATTTTAGAA
GAATGTTCGGATGTGCGTCAGTTTTATAGGAACAAATACCATGAAGTCATGGTAGATGAGTATCAAGATACCAACCACAC
GCAAGAGCGGATGCTAGAACTGTTATCAAATGGGGGTAATCGCTTTATGGTGGGGGATATTAAACAGTCTATTTATCGTT
TTCGTCAAGCGGATCCACAGATTTTTAATGAAAAATTCAAATTGTATCAAAGCGATAGTCAACAAGGGAAATTGATTGTC
TTAAAAGAGAATTTTCGCAGTCATTTGGAAGTCTTGGAAGCCACCAATGATGTTTTTAAGCGCCTCATGGATGAAGAAGT
GGGAGAAATTGATTACAATGAAACGCATTATCTGGTAGCTGGAAATCCCGATAAGAAAGAACCAAATCCCTTGTATCAGA
CAGAGTTTCTCATTTATGACGGAACTCTTGAGACAGATAATGAGGAGAACGACAAAGATGTTTCTTCTGTTTCTGCAGGA
GAAGTGGCGCTGGTTATCAAAGAAATTATTCGTTTGCATAATGAAGAAAATGTCCAATTTGAGGATATTACTTTACTAAC
AGCTTCACGCACACGCAACGATATGATTCTAGCTGAGTTCGCTAAATATGGTATTCCAATCGTTTCAGACGGTGGTGAGG
ACAATTACCTTCAGTCTGTTGAAGTCATGGTGATGTTAGACACCTTGCGTACAATTAATAACCCTCTCAATGATTATGCT
TTAGTGGCGCTTTTAAAATCGCCAATGTTCAACTTTACAGAAGATGAATTGGCACGTTTAGCTTTGCAAAAGAAGGTGAC
TGAGGCAAATTATGTTGTCCATCAGGAAAATCTCTATGAGAAGTTGAAGAATGCTCTGAATGGGTACGGTCACTATCCTG
AACTTATCACGCCTCCTCTTTTAAAAAAAATCCAGCAGTTTCAAGAAACACTACAGGCTTGGCGAGAGTATGCAAAAACA
AATTCGCTCTATGATTTGCTTTGGAAAATCTATCAAGATCGTTTTTATTACGATTATGTGGGAGCTTTACCAAATGGAGC
GGGACGTCAAGCTAATCTCTATGCCCTTACTTTGCGCGCAAATGATTACGAAAAAATGAGTTTTAAAGGCTTGTCACGTT
TTATCGGGATGATTGATAAAATATTGGAAACACAGAATGATTTAGCAAGTGTCGTTGTTGCAGCTCCGAAACACGCGGTT
CGCCTGATGACAGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTGCTCAATATGGACAAAGTTTTCAATCG
TAAAGATAGCAGTTCCGCTTTGATTCTCAGTCGTCAAAATGGCGTTGGTATCAAGTATGTAGCTGATGTAGCAGTAGATG
TTGCTGATAAGTTAGCTCCAAACCATGTTCGTTTGTCTATTAATACTCTGCCTTATGAGCAAAATGAGCGTGAGATTCAT
CTAGCCAGTATTTCTGAACAAATGCGTCTACTCTATGTCGCCATGACACGCGCTGAAAGGAAACTGTATTTAGTTGGTAA
AGGTCATCAGAAAAGTTTGGAGAAAAAAGGCTTTCCTACTCCAGTGAAGGAGCATTTAGCTGCATCTATCAGGCAAAGTA
TGACAAGTTTTCAAGATTGGATGTGGGCTTTACATGTAGTATTTGAGAAAGATAATCTAGCTTTTTCAACGCGATTTGTG
ACAGATAATGACTTGACAAGTGAAAAAATAGGTCAACTGAAATTGAAAGATGCGGTTATTGAAGAGGATTTAATAGACAA
TCGCCAATCTGAGGATATTCGCAGGGCTTTGGATATTTTGGAAAATGTAGATCGACTGAATACCAAGTATCAAGCTGCCA
TCCATTTACCGAGTGTTCGAACACCGAGTCAAATTAAGAAATTTTATGAACCAATTATGGATACAGATGGCGTTGAAATT
ATGGAGAAAAGGAATCCGACCATTGTAGGAAAAGCTTCTTTTGAGCTACCAAATTTTGCTAAAAAAGCTCCAGTTACAGG
AGCGCAAATTGGTAGCGCTGTCCATGAACTGATGCAGCGTATTCCTTTGGATCAAGCCCCTACGATAGCTATTTTGAGAA
AAGTTTTAAAACAGGTTCAGGCAGAAGAAAGTGTTAAAAAGAAAATTGATTTGCAAAAGATAGCTAGTTTTTTTGGGACT
GAACTTGGGCAGCTCCTTTTGAAGCATACAGACAGAGTATATCGTGAAGCTCCTTTTGCTATGTTAAAGCAGGATCCAGC
AAGTGGACAATATTTTGTAGTCCGTGGGATTCTGGACGGTTATCTACTGCTGACGGACCGAATCATTCTCTTTGATTACA
AGACGGATCGATATACAAATCCAAGTGAATTAGTGGAGCGCTACCAAGCACAATTAGCACTTTATGCTGAAGCTCTTAGT
CGTTCATACAGTATTGAAAAAGTTGAAAAATACTTAGTATTGTTAGGCGGAGCACAGCTTCAAGTGGTGAAAGTAGAATA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

60.571

99.918

0.605