Detailed information    

insolico Bioinformatically predicted

Overview


Name   uvrA   Type   Machinery gene
Locus tag   I6I87_RS09370 Genome accession   NZ_CP068109
Coordinates   2075352..2078306 (+) Length   984 a.a.
NCBI ID   WP_201664715.1    Uniprot ID   -
Organism   Moraxella osloensis strain FDAARGOS_1130     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2070352..2083306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I87_RS09350 (I6I87_09350) ssb 2070865..2071536 (-) 672 WP_201664706.1 single-stranded DNA-binding protein Machinery gene
  I6I87_RS09355 (I6I87_09355) - 2071674..2073038 (-) 1365 WP_201664709.1 MFS transporter -
  I6I87_RS09360 (I6I87_09360) - 2073234..2074223 (-) 990 WP_201664711.1 hypothetical protein -
  I6I87_RS09365 (I6I87_09365) - 2074432..2075256 (+) 825 WP_201664713.1 hypothetical protein -
  I6I87_RS09370 (I6I87_09370) uvrA 2075352..2078306 (+) 2955 WP_201664715.1 excinuclease ABC subunit UvrA Machinery gene
  I6I87_RS09375 (I6I87_09375) - 2078523..2079056 (+) 534 WP_159675907.1 chalcone isomerase family protein -
  I6I87_RS09380 (I6I87_09380) - 2079465..2080577 (+) 1113 WP_201664717.1 potassium channel family protein -
  I6I87_RS09385 (I6I87_09385) - 2080657..2082246 (-) 1590 WP_007116082.1 isocitrate lyase -

Sequence


Protein


Download         Length: 984 a.a.        Molecular weight: 108752.14 Da        Isoelectric Point: 6.7101

>NTDB_id=458900 I6I87_RS09370 WP_201664715.1 2075352..2078306(+) (uvrA) [Moraxella osloensis strain FDAARGOS_1130]
MAQHDAIKIRGARTHNLKNIDIDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSQMEKPEVDSIE
GLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARVGTPMCPEHHLPMVAQTVTEMVDTVMALPEDTKLMILARVIDD
RKGEHIQLMEQLKGQGFVRLRVDGEIYDIDDVPPLAKTFKHTIDVVVDRFKVRDDLGNRVAESLETALRLGSDIAILHDM
DAEFEDKILSAKHSCPVCDRSVAELEPKLFSFNNPYGACPVCDGLGKRQYFAAEKIIGHPEKSLNQGAIQGWDKRHAYYF
GLLTTVADHYGIDMEAPWQQLDKKHKDVILHGSGKDKMTFNFVDERGRKSTKTVPFEGVLPYMERRYRTTQSNIVRDELA
KYLADATCDACHGSRLNEIARHVEVSDRTIAEMVKLSIGEAMAYYEQLKLEGAKGEIAAKIIKEIRERLEFLVSVGLDYL
TLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLTRLRDLGNTVIVVEHDEDAIRLADHII
DVGVGAGVHGGSIIAEGTAKDIAKNPESLTGQYLSGKKKIAVPTVRHRAKVANDDKYEKMQDSAIPLTKNQAKKAESEKK
EKAKKGKVEAKPLMLTLTGAKGNNLKNVTLNLPIGVFTAITGVSGSGKSTLINRTLLPLATTQLNNATTHVAEEFDSITG
LEHLDKVVDIDQSPIGRTPRSNPATYTGVFSPIRDLFAQVPESKARGYQAGRFSFNVKGGRCETCQGDGLIKVEMHFLPD
MYVPCDACQGKRYNRETLEITYKGKNINDVLNMTVEDAAEFFEAIPAIYRRLQALQEVGLGYIRLGQSAPTLSGGEAQRV
KLAKELSKRDTGQTLYVLDEPTTGLHFHDIAKLLDILHTLRDRGNTVVVIEHNLDVIKTADWIVDLGPEGGSGGGEIIAE
GTPEEVAQNARSHTGRFLKPMLQA

Nucleotide


Download         Length: 2955 bp        

>NTDB_id=458900 I6I87_RS09370 WP_201664715.1 2075352..2078306(+) (uvrA) [Moraxella osloensis strain FDAARGOS_1130]
ATGGCACAGCACGACGCAATCAAAATCCGTGGCGCACGCACCCACAATCTCAAAAACATCGACATCGACATCCCCCGCGA
CAAACTCGTCGTCATCACAGGTTTATCAGGCTCAGGCAAGTCTAGCCTAGCCTTTGACACCCTATACGCCGAAGGACAAC
GCCGCTACGTCGAGAGCCTATCGGCATACGCCCGTCAGTTTTTATCACAAATGGAAAAGCCCGAAGTCGATAGCATCGAA
GGGCTGTCACCTGCCATTGCCATTGAGCAAAAATCCACCAACCATAACCCCCGCTCCACGGTGGGGACGATTACCGAGAT
TTATGACTATTTGCGTCTGCTGTATGCCCGTGTCGGCACGCCCATGTGCCCTGAACACCATCTGCCGATGGTCGCGCAAA
CCGTCACCGAAATGGTCGATACCGTCATGGCATTGCCCGAAGATACCAAGTTGATGATTCTCGCGCGCGTCATCGATGAC
CGCAAAGGTGAGCATATTCAGCTCATGGAACAGCTGAAAGGGCAAGGTTTTGTACGGCTGCGGGTCGATGGCGAAATTTA
TGACATTGACGATGTGCCACCGCTTGCCAAAACCTTTAAACACACCATTGATGTGGTGGTTGACCGCTTCAAAGTGCGCG
ATGATTTGGGAAATCGGGTTGCCGAAAGCTTGGAGACCGCCTTACGACTCGGTAGCGATATTGCCATCTTGCATGACATG
GACGCTGAGTTTGAGGATAAAATTTTGTCCGCCAAACATAGCTGCCCTGTCTGCGATCGCTCGGTTGCTGAGCTTGAACC
AAAATTATTTAGTTTTAACAACCCCTATGGCGCGTGTCCCGTGTGTGATGGCTTGGGCAAACGCCAATATTTCGCTGCCG
AAAAAATCATCGGGCATCCTGAAAAATCGCTCAACCAAGGGGCGATTCAAGGCTGGGATAAACGCCACGCCTACTATTTT
GGCTTGCTGACTACCGTTGCCGACCATTACGGCATTGATATGGAAGCACCTTGGCAACAACTGGATAAAAAGCACAAAGA
TGTCATTTTACACGGCTCTGGTAAAGACAAAATGACTTTTAACTTTGTCGATGAACGGGGTCGCAAATCTACCAAAACCG
TGCCATTTGAAGGGGTGTTGCCGTATATGGAGCGCCGTTACCGCACCACGCAAAGCAATATCGTGCGAGATGAGCTTGCC
AAATACCTTGCCGATGCCACCTGCGATGCCTGTCACGGCTCACGCTTAAACGAAATCGCTCGCCATGTGGAAGTCAGCGA
CCGTACCATTGCCGAAATGGTCAAGCTATCAATTGGCGAAGCGATGGCGTATTACGAGCAATTAAAACTCGAGGGCGCAA
AGGGCGAAATCGCCGCCAAAATCATCAAAGAAATCCGTGAACGGTTGGAATTTTTGGTGAGTGTGGGCTTGGATTATCTC
ACCCTTGCCCGCTCTGCCGAAACCCTATCGGGCGGTGAAGCTCAGCGCATACGTCTTGCTAGCCAAATCGGGGCAGGCTT
GATGGGCGTGATGTATGTACTCGACGAGCCATCAATCGGCTTGCACCAACGTGACAATGACCGACTGCTGCAAACGTTGA
CTCGCTTGCGTGATTTGGGCAATACCGTGATTGTCGTCGAGCATGACGAAGATGCCATTCGCCTAGCCGACCATATCATC
GATGTGGGTGTGGGTGCTGGCGTACATGGTGGCAGTATTATTGCAGAAGGGACGGCAAAAGACATTGCCAAAAATCCTGA
ATCATTGACCGGTCAATATTTATCGGGCAAAAAGAAAATTGCAGTGCCAACCGTGCGTCACCGAGCCAAAGTCGCCAATG
ACGATAAATATGAAAAAATGCAAGACTCCGCCATTCCCTTAACCAAAAACCAAGCGAAAAAAGCGGAAAGCGAGAAAAAA
GAAAAAGCCAAAAAAGGTAAAGTCGAAGCCAAACCTTTGATGCTAACCTTGACAGGGGCAAAAGGTAACAACCTTAAAAA
CGTGACCTTAAACTTGCCGATTGGTGTATTTACCGCCATCACAGGCGTGTCGGGTTCGGGTAAATCGACCTTAATCAACC
GCACCTTATTGCCACTAGCGACCACGCAGCTCAATAATGCCACCACCCATGTGGCCGAAGAGTTTGACAGTATCACTGGG
CTAGAACATCTGGATAAAGTCGTCGATATCGACCAAAGTCCGATTGGGCGTACCCCTCGCTCCAATCCTGCAACCTATAC
GGGGGTATTTAGTCCGATTCGTGACCTATTCGCCCAAGTGCCCGAGTCCAAAGCTCGTGGCTATCAAGCAGGGCGTTTTA
GCTTCAACGTGAAAGGCGGGCGCTGTGAAACCTGCCAAGGCGATGGCTTGATTAAGGTTGAGATGCACTTTTTGCCTGAT
ATGTATGTGCCTTGCGATGCGTGTCAAGGCAAACGCTACAACCGTGAAACCCTTGAAATCACCTATAAGGGCAAAAATAT
CAATGACGTGCTCAATATGACGGTGGAAGATGCGGCGGAATTTTTTGAGGCGATTCCGGCAATTTACCGCCGTTTGCAAG
CCCTACAAGAAGTCGGCTTAGGTTATATTCGTTTAGGTCAGTCTGCACCAACCTTGTCGGGTGGTGAGGCGCAACGGGTG
AAACTTGCCAAAGAGCTATCCAAACGTGATACCGGTCAGACCTTGTATGTGCTCGATGAGCCGACGACAGGTTTGCATTT
CCATGATATCGCCAAGCTCCTAGACATCTTGCATACGCTACGTGATCGAGGCAATACCGTGGTGGTGATTGAGCATAATC
TCGATGTGATTAAGACGGCGGATTGGATTGTGGATTTGGGTCCTGAAGGCGGTTCGGGCGGTGGTGAGATTATCGCTGAG
GGTACGCCAGAAGAGGTAGCGCAAAACGCCCGCTCACACACAGGGCGGTTCTTAAAACCAATGCTACAAGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

55.386

100

0.554

  uvrA Streptococcus pneumoniae TIGR4

55.386

100

0.554

  uvrA Streptococcus pneumoniae D39

55.386

100

0.554