Detailed information NTG0458838

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6J12_RS09690
• Genome accession: NZ_CP068060
• Coordinates: 2018118..2019215 (+)
• Length: 365 a.a.
• NCBI ID: WP_004225039.1
• Uniprot ID: I0S850
• Organism: Streptococcus anginosus strain FDAARGOS_1155
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2013118..2024215

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J12_RS09665 (I6J12_09665)	pgsA	2013588..2014127 (-)	540	WP_004225055.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
I6J12_RS09670 (I6J12_09670)	rodZ	2014138..2014959 (-)	822	WP_004225043.1	cytoskeleton protein RodZ	-
I6J12_RS09675 (I6J12_09675)	yfmH	2015018..2016313 (-)	1296	WP_003038252.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6J12_RS09680 (I6J12_09680)	yfmF	2016313..2017560 (-)	1248	WP_004225053.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6J12_RS09685 (I6J12_09685)	yaaA	2017736..2018116 (+)	381	WP_003038263.1	S4 domain-containing protein YaaA	-
I6J12_RS09690 (I6J12_09690)	recF	2018118..2019215 (+)	1098	WP_004225039.1	DNA replication/repair protein RecF	Machinery gene
I6J12_RS09695 (I6J12_09695)	guaB	2019304..2020785 (-)	1482	WP_003038256.1	IMP dehydrogenase	-
I6J12_RS09700 (I6J12_09700)	trpS	2020915..2021940 (-)	1026	WP_003038251.1	tryptophan--tRNA ligase	-
I6J12_RS09705 (I6J12_09705)	galE	2022022..2023017 (-)	996	WP_004225065.1	UDP-glucose 4-epimerase GalE	-
I6J12_RS09710 (I6J12_09710)	-	2023038..2023727 (-)	690	WP_004225021.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41983.25 Da
• Isoelectric Point: 8.4478

>NTDB_id=458838 I6J12_RS09690 WP_004225039.1 2018118..2019215(+) (recF) [Streptococcus anginosus strain FDAARGOS_1155]
MWLKNLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGN
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVVLFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSNYHHVLKQR
NTYLKTAKTMDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENLTIKYCSSVPLSDSNKLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQNMPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=458838 I6J12_RS09690 WP_004225039.1 2018118..2019215(+) (recF) [Streptococcus anginosus strain FDAARGOS_1155]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAACGCTCAAGGAAAAACAAATATCTTGGAAGCTATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGATACCCTGAAAATATCTGGACAACTTGTCAAGCAAACTGGAAAT
ATTTCTTTGGAAATTGACTTGACACCTAAAGGAAGAATTACAAAAGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTGTTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAACCAATCTATTTATCTGATTTATCAAATTACCACCATGTCTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATGGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTAGAGTTTGGTTG
TCGTGTTATGCAGCATAGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGCCAACAAAAGCATTTGGAACTCTCAAGTC
ATTTAGAAAACTTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAAGTTAAAAGAATCTTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGCGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAACATGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGACATTTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: I0S850

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.905	98.082	0.715
recF	Bacillus subtilis subsp. subtilis str. 168	47.701	95.342	0.455