Detailed information    

insolico Bioinformatically predicted

Overview


Name   rexA   Type   Machinery gene
Locus tag   I6J12_RS02090 Genome accession   NZ_CP068060
Coordinates   433478..437158 (+) Length   1226 a.a.
NCBI ID   WP_003037370.1    Uniprot ID   I0SB94
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 428478..442158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS02080 (I6J12_02080) - 428875..430089 (+) 1215 WP_003037373.1 ABC transporter permease -
  I6J12_RS02085 (I6J12_02085) rexB 430209..433481 (+) 3273 WP_003037196.1 ATP-dependent nuclease subunit B Machinery gene
  I6J12_RS02090 (I6J12_02090) rexA 433478..437158 (+) 3681 WP_003037370.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  I6J12_RS02095 (I6J12_02095) glgB 437628..439538 (+) 1911 WP_003037495.1 1,4-alpha-glucan branching protein GlgB -
  I6J12_RS02100 (I6J12_02100) - 439542..440684 (+) 1143 WP_003025294.1 glucose-1-phosphate adenylyltransferase -
  I6J12_RS02105 (I6J12_02105) glgD 440674..441813 (+) 1140 WP_003037220.1 glucose-1-phosphate adenylyltransferase subunit GlgD -

Sequence


Protein


Download         Length: 1226 a.a.        Molecular weight: 141302.11 Da        Isoelectric Point: 5.7216

>NTDB_id=458779 I6J12_RS02090 WP_003037370.1 433478..437158(+) (rexA) [Streptococcus anginosus strain FDAARGOS_1155]
MRQIPFLSQEEIYTLQDQEAQSNKAQKRTPEQIEAIYSSGQNILVSASAGSGKTFVMVQRIIDQILRGVRIDQLFISTFT
VKAASELKERLEKELSKALKATGDEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQSASEQLLLQ
NEVFEQVFEEFYQSDQAALFKKLVKNFTGQRKDLLGFREQVYKIYAFLQPTSNPIAWLEKDFLKGYERADFQEEEARLLA
QIKEALYDLEDFFHYHLANEAKEFPKAKYLENVQSVLDCLVGLQEQSSEEAYLTALDRIVEISRASNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQVTYHEEAKEILLVLQQFMKSFVTSYLQRKKEENAFEFADISHFAIQILE
EFPDVRHFYRTKYHEVMVDEYQDTNHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNEKFKTYQDDSQQGKLIV
LKENFRSHVEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPDKKEPNPQYQTEFLIYDGTLETNNEENDKDVSSVSAG
EVALVIKEIIRLHNEENVPFEDMTLLTASRTRNDVILSEFAKYGIPVVSDGGEDNYLQSVEVMVMLDTLRTINNPLNDYA
LVALLKSPMFTFTEDELARLALQKKVTEATYVTHQENLYEKLKNALSGNGQHPELITPPLLKKIQQFQEILLDWREYAKT
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVSAAPKHAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDSSSALILSRQNGVGIKYVADVAVDVADKLAPNHVRLSINTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGHQKSLEKKSFPTPVKGHLAASIRQSMTSFQDWMWALHVVFEKDNLAFSTHFV
TDSDLTDEKIGQLKLKDAIIEESMVHNRQSEDIRRALDILENVDRLNTKYQAAIRLPSVRTPSQIKKFYEPIMDTDGVEI
MEKRNPTIVGKASFELPNFAKKAPVTGAQIGSAVHELMQRIPLDQAPTIAILRKVLKQVQAEESVKKKIDLQKIASFFGT
ELGQLLLKHTDRVYREAPFAMLKQDPASGQYFVVRGILDGYLLLTDRIILFDYKTDRYTNPSELVERYQAQLALYTEALS
RSYSIEKVEKYLVLLGGAQLQVVKVE

Nucleotide


Download         Length: 3681 bp        

>NTDB_id=458779 I6J12_RS02090 WP_003037370.1 433478..437158(+) (rexA) [Streptococcus anginosus strain FDAARGOS_1155]
ATGAGACAGATTCCATTTTTGAGTCAGGAAGAAATCTATACTTTGCAGGACCAAGAAGCCCAGTCTAACAAAGCTCAAAA
ACGTACACCAGAGCAAATCGAAGCCATTTACTCCTCTGGTCAAAATATCCTTGTGTCTGCTTCTGCAGGATCAGGAAAAA
CCTTTGTTATGGTGCAACGGATTATTGACCAAATTCTGCGAGGAGTTCGCATTGACCAGCTCTTCATTTCGACCTTTACC
GTTAAAGCCGCAAGTGAGCTAAAAGAGCGCTTGGAGAAAGAGTTATCCAAGGCTTTGAAGGCAACAGGCGATGAGGAGCT
CAAACAGCATTTGGCACAGCAATTAGCTGATATTCCGAATGCTGACATTGGTACCATGGACTCTTTCACTCAAAAAGTCC
TAAATAAATATGGTTATCTCCTAGAATTGGCACCGAATTTTCGCATTTTACAAAGCGCAAGTGAGCAGTTATTGCTGCAA
AATGAAGTTTTTGAGCAAGTTTTTGAAGAATTCTATCAATCTGATCAGGCTGCTTTATTTAAAAAATTAGTCAAAAACTT
TACCGGTCAAAGAAAAGATTTGCTTGGTTTTCGAGAGCAGGTTTATAAGATTTATGCTTTTTTGCAACCCACCAGTAATC
CAATAGCATGGTTAGAAAAAGACTTTTTGAAAGGCTATGAGCGTGCGGATTTCCAAGAAGAAGAAGCGCGACTTTTAGCA
CAAATAAAAGAAGCTCTTTATGACCTAGAAGATTTTTTCCATTATCATTTGGCGAATGAAGCCAAGGAATTTCCCAAAGC
AAAATACCTTGAGAATGTGCAGAGCGTGCTTGATTGTCTGGTAGGCTTACAAGAGCAGTCCTCTGAGGAAGCTTATCTCA
CAGCACTTGATAGAATTGTAGAGATTTCACGCGCAAGCAATGGCAAAGCCTTGACAAACAGCGGACGAAAAGAAGAATTA
AAAGAAATCATCAACGCCTATAATGAAAAGCGCAAGGAAAAGATTCAAGTTTTACGAGATTTGGCAGATCAATTTTACCG
TTTTGAATTTCAAGTGACCTATCATGAGGAAGCCAAGGAAATCTTGCTTGTCTTGCAGCAATTTATGAAATCGTTTGTGA
CAAGCTATCTACAACGGAAAAAAGAAGAAAATGCGTTTGAATTTGCAGACATCAGTCATTTTGCCATTCAGATTTTAGAA
GAATTTCCTGATGTGCGCCACTTTTATCGGACAAAATATCATGAAGTCATGGTGGACGAGTATCAGGATACCAACCATAC
GCAGGAGCGTATGCTGGAGCTGTTATCAAATGGGCATAATCGCTTTATGGTGGGGGATATTAAGCAATCTATTTACCGTT
TTCGTCAGGCTGATCCACAGATTTTTAATGAGAAATTTAAAACCTATCAAGACGATAGCCAGCAAGGGAAATTGATTGTT
TTGAAAGAGAATTTCCGCAGTCATGTGGAAGTCTTGGAAGCCACGAATGACGTTTTCAAACGTCTCATGGATGAGGAAGT
GGGAGAAATTGATTACAATGAAACGCATTATCTAGTAGCTGGAAATCCTGATAAGAAAGAGCCAAATCCACAATATCAGA
CGGAGTTTCTCATTTATGACGGAACGCTTGAGACGAATAATGAGGAGAATGACAAGGATGTTTCTTCTGTTTCTGCAGGA
GAAGTAGCGCTGGTCATTAAGGAAATTATCCGTCTGCACAATGAGGAAAATGTCCCATTTGAAGATATGACATTGCTAAC
GGCTTCGCGGACGCGCAACGATGTGATTTTATCTGAGTTTGCCAAATACGGTATCCCAGTCGTTTCAGACGGTGGCGAGG
ATAATTATTTGCAATCTGTAGAAGTTATGGTGATGTTGGATACCCTGCGTACGATTAACAATCCGCTCAATGATTATGCT
TTGGTGGCACTTCTAAAGTCACCAATGTTCACCTTTACTGAGGATGAATTGGCTCGTTTGGCCTTGCAAAAAAAGGTGAC
AGAAGCTACTTATGTTACTCATCAAGAAAATCTTTATGAGAAATTGAAAAATGCTCTGAGTGGGAACGGTCAACATCCCG
AACTCATCACACCTCCTCTTTTAAAGAAAATCCAGCAGTTTCAAGAAATACTGCTGGATTGGCGAGAGTATGCAAAAACA
AATTCACTATATGATTTGCTTTGGAAAATTTATCAAGATCGCTTTTATTACGATTATGTGGGAGCCCTACCAAATGGAGC
GGGACGTCAGGCCAATCTTTATGCGCTGACCTTACGAGCAAATGATTACGAAAAAATGAGTTTTAAAGGCTTGTCACGTT
TTATTGGGATGATTGATAAAATCTTGGAAACACAGAATGATTTAGCCAGTGTAGTCAGTGCAGCTCCGAAACATGCGGTT
CGCCTGATGACGGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTACTCAATATGGACAAAGTATTTAATCG
TAAAGACAGCAGTTCTGCTTTGATTCTCAGTCGTCAAAATGGTGTTGGAATCAAGTATGTTGCTGATGTAGCAGTAGATG
TTGCTGATAAGTTAGCTCCAAACCATGTTCGTTTGTCTATTAATACTCTGCCTTATGAGCAAAATGAGCGTGAGATTCAT
CTAGCCAGTATTTCTGAGCAAATGCGTCTACTCTATGTCGCCATGACACGCGCTGAAAGGAAACTGTATTTAGTTGGTAA
AGGTCATCAGAAAAGTTTGGAGAAAAAAAGCTTCCCTACTCCAGTGAAGGGGCATTTAGCTGCATCTATCAGGCAAAGTA
TGACAAGTTTTCAAGATTGGATGTGGGCTTTACATGTAGTATTTGAGAAAGATAATCTAGCCTTTTCAACACATTTTGTG
ACAGATAGTGATTTGACGGATGAAAAAATAGGTCAACTGAAATTGAAAGATGCGATTATTGAAGAGAGTATGGTGCATAA
TCGCCAATCTGAGGATATTCGTAGGGCTTTGGATATTTTGGAAAATGTAGATCGACTGAATACCAAGTATCAAGCTGCCA
TCCGTTTACCGAGTGTTCGAACACCGAGTCAAATTAAGAAATTTTATGAACCGATTATGGATACAGACGGCGTTGAAATT
ATGGAGAAAAGGAATCCGACCATTGTAGGAAAAGCTTCTTTTGAGCTACCAAATTTTGCTAAAAAAGCTCCAGTTACAGG
AGCGCAAATCGGTAGCGCTGTCCATGAACTGATGCAGCGTATTCCTTTGGATCAAGCCCCTACGATAGCTATTTTGAGAA
AAGTTTTAAAACAGGTTCAGGCAGAAGAAAGTGTTAAAAAGAAAATTGATTTGCAAAAGATAGCTAGTTTTTTTGGGACT
GAACTTGGGCAGCTCCTTTTGAAGCATACAGACAGAGTATATCGTGAAGCTCCTTTTGCTATGTTAAAGCAGGATCCAGC
AAGTGGACAATATTTTGTAGTCCGTGGGATTCTGGACGGTTATCTACTGTTGACGGACCGAATCATTCTCTTTGATTACA
AGACGGATCGATATACAAATCCAAGTGAATTAGTGGAGCGCTACCAAGCACAATTAGCACTTTATACTGAAGCTCTTAGT
CGTTCATACAGTATTGAAAAAGTTGAAAAATACTTAGTGTTGTTAGGCGGAGCACAGCTTCAAGTGGTGAAAGTAGAATA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0SB94

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

60.898

99.918

0.608