Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   I6J14_RS09055 Genome accession   NZ_CP068057
Coordinates   1800222..1800671 (+) Length   149 a.a.
NCBI ID   WP_003052921.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1795222..1805671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS09035 (I6J14_09035) - 1796707..1797234 (+) 528 WP_037585149.1 5-formyltetrahydrofolate cyclo-ligase -
  I6J14_RS09040 (I6J14_09040) - 1797231..1797905 (+) 675 WP_003052927.1 rhomboid family intramembrane serine protease -
  I6J14_RS09045 (I6J14_09045) hasC 1798069..1798971 (-) 903 WP_003052925.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  I6J14_RS09050 (I6J14_09050) - 1799003..1800019 (-) 1017 WP_003052923.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  I6J14_RS09055 (I6J14_09055) rcrR 1800222..1800671 (+) 450 WP_003052921.1 MarR family transcriptional regulator Regulator
  I6J14_RS09060 (I6J14_09060) rcrP 1800664..1802373 (+) 1710 WP_115253150.1 ABC transporter ATP-binding protein Regulator
  I6J14_RS09065 (I6J14_09065) - 1802373..1804157 (+) 1785 WP_115253149.1 ABC transporter ATP-binding protein -
  I6J14_RS09070 (I6J14_09070) - 1804276..1805043 (+) 768 WP_003052915.1 epoxyqueuosine reductase QueH -
  I6J14_RS09075 (I6J14_09075) - 1805152..1805598 (+) 447 WP_115253148.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17414.31 Da        Isoelectric Point: 9.7963

>NTDB_id=458718 I6J14_RS09055 WP_003052921.1 1800222..1800671(+) (rcrR) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MSRVIADLRELTHQVEQISDEIAKKYNLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIK
VLPSQVDKRYKQVILAKAGREKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=458718 I6J14_RS09055 WP_003052921.1 1800222..1800671(+) (rcrR) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGTCACGAGTAATTGCGGATTTGCGTGAGTTGACACATCAGGTTGAACAAATTAGCGATGAAATTGCAAAGAAATATAA
CCTTGAACATTTAGCAGGACCCCAGGGACACGTTTTGGTTTTTCTATCCAAGCATCAAGATCAAGAAATTTTTGTGAAGG
ACATTGAAAAAGAACTCCAAATTTCAAAATCAGTTACCAGTAATCTTGTTAAACGCATGGTCAAAAATGGTTTTATTAAG
GTTCTTCCTTCCCAAGTAGATAAGCGCTACAAGCAAGTCATTTTGGCTAAGGCAGGACGGGAGAAACTGCCTTTGTTGCA
AGAATGTCGTAAGGATATTGAACATTATTTCTTTAAAGAAATCACGAGAGAGGAGTTGCTGACGGTTAAAAAGGTGATTC
AGCAGCTTAAGCAAAATATGCTAACTTACAAAGGAGAGAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43