Detailed information NTG0458710

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6J14_RS08340
• Genome accession: NZ_CP068057
• Coordinates: 1640282..1641388 (-)
• Length: 368 a.a.
• NCBI ID: WP_003053196.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain FDAARGOS_1157
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1635282..1646388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J14_RS10960	-	1636607..1636918 (+)	312	WP_236593267.1	IS3 family transposase	-
I6J14_RS08325 (I6J14_08325)	-	1636915..1637430 (+)	516	WP_160147953.1	IS3 family transposase	-
I6J14_RS08330 (I6J14_08330)	guaB	1637670..1639151 (+)	1482	WP_003053202.1	IMP dehydrogenase	-
I6J14_RS08335 (I6J14_08335)	-	1639362..1640225 (+)	864	WP_003053198.1	GRP family sugar transporter	-
I6J14_RS08340 (I6J14_08340)	recF	1640282..1641388 (-)	1107	WP_003053196.1	DNA replication/repair protein RecF	Machinery gene
I6J14_RS08345 (I6J14_08345)	yaaA	1641390..1641803 (-)	414	WP_115253224.1	S4 domain-containing protein YaaA	-
I6J14_RS08350 (I6J14_08350)	-	1642124..1643368 (+)	1245	WP_115276479.1	pitrilysin family protein	-
I6J14_RS08355 (I6J14_08355)	-	1643370..1644653 (+)	1284	WP_115253223.1	pitrilysin family protein	-
I6J14_RS08360 (I6J14_08360)	-	1644703..1645737 (+)	1035	WP_115253222.1	helix-turn-helix domain-containing protein	-
I6J14_RS08365 (I6J14_08365)	pgsA	1645751..1646293 (+)	543	WP_003053186.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41969.91 Da
• Isoelectric Point: 8.4064

>NTDB_id=458710 I6J14_RS08340 WP_003053196.1 1640282..1641388(-) (recF) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MWIKELELKHYRNYDHLLTSFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGTRVMEHRINFINTLEKEANTHHQAISNGLENLSLSYQSSVVFDKKTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKVLTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=458710 I6J14_RS08340 WP_003053196.1 1640282..1641388(-) (recF) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGTAATTATGACCACCTGCTTACCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGGA
CGAGGGCTGACAAAGAATTGATTCATTTTGATCACTCAACTGTTTCCCTTACTGGTAAGATTCAGCGCATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATCGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGCCGAAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGTATTAATTTTATCAATACTTTGGAAAAAGAAGCGAATACCCATCACCAAGCCATCTCAAATG
GTTTAGAAAATCTCTCCCTCTCCTATCAGTCGTCAGTTGTCTTTGATAAAAAAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAAAAAGATTTCTTCCGTAAAAACACTAGTGTTGGCCCACATCGCGATGACTTGGCCTTTTA
CATTAACGGTATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCTTTAAAAATGGCTGAAGTTA
GTTTAATGAAAGTCTTGACTGGAGATAATCCCATTCTTTTATTAGATGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAATT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGAGATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.187	98.913	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.455	100	0.462