Detailed information NTG0458573

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6J15_RS03225
• Genome accession: NZ_CP068056
• Coordinates: 613849..614943 (-)
• Length: 364 a.a.
• NCBI ID: WP_020917660.1
• Uniprot ID: A0AB33APR8
• Organism: Streptococcus lutetiensis strain FDAARGOS_1158
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 608849..619943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J15_RS03210 (I6J15_03210)	trpS	609944..610966 (+)	1023	WP_020917663.1	tryptophan--tRNA ligase	-
I6J15_RS03215 (I6J15_03215)	guaB	611190..612671 (+)	1482	WP_043895168.1	IMP dehydrogenase	-
I6J15_RS03220 (I6J15_03220)	-	612917..613783 (+)	867	WP_020917661.1	GRP family sugar transporter	-
I6J15_RS03225 (I6J15_03225)	recF	613849..614943 (-)	1095	WP_020917660.1	DNA replication/repair protein RecF	Machinery gene
I6J15_RS03230 (I6J15_03230)	yaaA	614946..615329 (-)	384	WP_167394769.1	S4 domain-containing protein YaaA	-
I6J15_RS03235 (I6J15_03235)	yfmF	615416..616660 (+)	1245	WP_111713062.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6J15_RS03240 (I6J15_03240)	yfmH	616661..617950 (+)	1290	WP_111713061.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6J15_RS03245 (I6J15_03245)	-	618016..618960 (+)	945	WP_020917656.1	helix-turn-helix domain-containing protein	-
I6J15_RS03250 (I6J15_03250)	pgsA	618973..619527 (+)	555	WP_111713060.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42104.40 Da
• Isoelectric Point: 8.2975

>NTDB_id=458573 I6J15_RS03225 WP_020917660.1 613849..614943(-) (recF) [Streptococcus lutetiensis strain FDAARGOS_1158]
MWIQKIALKNYRNYLTNELEFFPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRSDKELIHFQEKELRVSGILQRSSGT
VPLEINLSSKGRVTKVNHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NTYLKTAEKVDINFLAVLDEQLADFGSRVMEHRLDFVSNLEKEADRYHYAISNGLEHLKIRYLSSVPFQEKSEIKEYFLK
TLEKNRKRDIFKKNTGAGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKNVTGDYPILLLDDVMSELDNYRQ
TELLKMIIAENVQTFITTTSLEHLSKLPEELKIFTVNQGTIEEN

Nucleotide

• Length: 1095 bp

>NTDB_id=458573 I6J15_RS03225 WP_020917660.1 613849..614943(-) (recF) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGTGGATTCAAAAAATAGCCTTAAAAAATTATCGTAATTATTTAACCAATGAGCTTGAATTTTTTCCCGGGCTAAATGT
CTTTATCGGGAAAAACGCTCAAGGAAAAACAAATTTCTTAGAAGCTATTTATTTCTTATCTTTAACACGTAGCCACCGTA
CACGTTCCGACAAAGAGCTGATTCACTTTCAAGAAAAAGAACTTCGTGTCTCAGGTATTCTGCAACGCTCAAGTGGGACA
GTTCCTTTGGAAATCAATCTATCAAGTAAAGGACGAGTCACTAAAGTTAATCACCTCAAACAAGCTAAATTATCCGACTA
TATCGGAGTGATGACAGTCGTCTTATTTGCACCTGAAGATTTACAACTCATCAAAGGAGCTCCGAGTTTACGTCGTAAGT
TTATTGATATTGATTTAGGTCAAATCAAACCTATCTACCTATCTGATTTGTCTAATTACAATCATGTCCTTAAACAACGT
AACACTTATCTGAAGACCGCTGAAAAAGTTGACATCAACTTTTTAGCAGTCCTTGATGAGCAATTAGCTGATTTTGGTAG
TCGCGTAATGGAACATCGCTTAGATTTCGTCTCTAATCTCGAAAAAGAAGCCGACCGCTATCACTATGCCATCTCTAATG
GCCTAGAACATTTGAAAATTCGCTATCTATCATCTGTGCCATTCCAAGAAAAAAGTGAAATCAAAGAATACTTCTTAAAA
ACATTGGAAAAGAATCGCAAACGTGATATCTTCAAAAAAAATACTGGTGCTGGACCTCATCGTGATGATTTGGAATTTTT
CATCAATGACATGCCTGCCAATTTTGGTAGCCAAGGACAACACCGTAGTTTGATTTTATCTCTTAAGATGGCTGAAATTG
AACTCATTAAGAATGTCACTGGTGATTATCCAATTCTACTTCTTGACGATGTCATGAGTGAATTAGATAACTACCGACAA
ACAGAATTGTTAAAAATGATTATTGCTGAAAATGTTCAAACCTTTATCACAACGACAAGTCTTGAACACCTTTCTAAACT
TCCAGAAGAGTTGAAAATTTTCACTGTTAATCAAGGAACTATTGAAGAAAACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

3D structure

• AlphaFold DB: A0AB33APR8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.11	100	0.651
recF	Bacillus subtilis subsp. subtilis str. 168	44.715	100	0.453