Detailed information NTG0458281

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: JJN14_RS09925
• Genome accession: NZ_CP067992
• Coordinates: 2016203..2017300 (+)
• Length: 365 a.a.
• NCBI ID: WP_201058568.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain S022-V7-A3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2011203..2022300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JJN14_RS09900 (JJN14_09900)	pgsA	2011698..2012243 (-)	546	WP_125386272.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
JJN14_RS09905 (JJN14_09905)	rodZ	2012253..2013083 (-)	831	WP_201058564.1	cytoskeleton protein RodZ	-
JJN14_RS09910 (JJN14_09910)	yfmH	2013143..2014426 (-)	1284	WP_201058565.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
JJN14_RS09915 (JJN14_09915)	yfmF	2014423..2015673 (-)	1251	WP_201058566.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
JJN14_RS09920 (JJN14_09920)	yaaA	2015832..2016200 (+)	369	WP_201058567.1	S4 domain-containing protein YaaA	-
JJN14_RS09925 (JJN14_09925)	recF	2016203..2017300 (+)	1098	WP_201058568.1	DNA replication/repair protein RecF	Machinery gene
JJN14_RS09930 (JJN14_09930)	guaB	2017350..2018828 (-)	1479	WP_201058569.1	IMP dehydrogenase	-
JJN14_RS09935 (JJN14_09935)	trpS	2018980..2020005 (-)	1026	WP_201058570.1	tryptophan--tRNA ligase	-
JJN14_RS09940 (JJN14_09940)	-	2020211..2021833 (+)	1623	WP_000958774.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42021.35 Da
• Isoelectric Point: 9.8099

>NTDB_id=458281 JJN14_RS09925 WP_201058568.1 2016203..2017300(+) (recF) [Streptococcus mitis strain S022-V7-A3]
MWLQNLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSVRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFARKKHFELSNQIEELSISYQSSVKITDKQNLSKSFKI
ALEKSRTRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPKNLSIFTIQGGKVFVNEN

Nucleotide

• Length: 1098 bp

>NTDB_id=458281 JJN14_RS09925 WP_201058568.1 2016203..2017300(+) (recF) [Streptococcus mitis strain S022-V7-A3]
ATGTGGCTACAAAACCTATCTCTCAAGACTTTTCGTAACTACAAAGAGACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTAGGACGCAATGCACAAGGAAAAACAAATATGCTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTGACAAAAGTTAATCACTTAAAACAGGCGCGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTTTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGGTTCGACGGAAAT
TCATTGATATGGAACTTGGACAAATCAAGCCAATCTATTTATCTGACTTAACCAATTATAATCACATCCTAAAACAAAGA
AACACTTATCTAAAATCAGCTCAAAAAATAGATGAAACCTTCCTTTCAGTATTGGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGCGCGTAAGAAACATTTTGAACTCTCAAATC
AGATTGAAGAGTTGTCAATATCTTATCAATCTTCTGTCAAGATAACTGACAAACAAAACTTATCCAAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGAACCAGAGATTTATTTAAAAAGAATACTGGCGTTGGTCCTCATCGAGATGATATTTCTTTTTA
TATAAATGGGATGGATGCTAGCTTTGGAAGTCAAGGTCAACATCGCAGTCTCGTCCTTTCTATAAAATTAGCAGAAATCG
AGTTAATGGAAAGTATTACTACAGAATCTCCGATATTATTGCTTGACGATGTTATGAGTGAACTTGACAATACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAGTCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTACC
AAAAAATCTAAGTATCTTCACTATTCAGGGTGGTAAAGTTTTTGTAAACGAAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	96.986	100	0.97
recF	Bacillus subtilis subsp. subtilis str. 168	46.739	100	0.471