Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SA190iCDA_RS01215 Genome accession   NZ_CP056087
Coordinates   263938..264345 (-) Length   135 a.a.
NCBI ID   WP_070885873.1    Uniprot ID   A0A1Q9Y6M3
Organism   Pseudomonas argentinensis strain SA190     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 258938..269345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA190iCDA_RS01195 - 259893..260741 (-) 849 WP_070886184.1 CheR family methyltransferase -
  SA190iCDA_RS01200 - 260810..262858 (-) 2049 WP_070885875.1 methyl-accepting chemotaxis protein -
  SA190iCDA_RS01205 - 262941..263480 (-) 540 WP_070885874.1 chemotaxis protein CheW -
  SA190iCDA_RS01210 pilH 263524..263889 (-) 366 WP_013789448.1 twitching motility response regulator PilH -
  SA190iCDA_RS01215 pilG 263938..264345 (-) 408 WP_070885873.1 twitching motility response regulator PilG Regulator
  SA190iCDA_RS01220 gshB 264574..265536 (+) 963 WP_070885872.1 glutathione synthase -
  SA190iCDA_RS01225 - 265621..266517 (+) 897 WP_070885871.1 energy transducer TonB -
  SA190iCDA_RS01230 - 266587..267156 (+) 570 WP_070885870.1 YqgE/AlgH family protein -
  SA190iCDA_RS01235 ruvX 267156..267599 (+) 444 WP_013789443.1 Holliday junction resolvase RuvX -
  SA190iCDA_RS01240 pyrR 267621..268142 (+) 522 WP_070885869.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  SA190iCDA_RS01245 - 268139..269146 (+) 1008 WP_070885868.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14856.20 Da        Isoelectric Point: 6.7128

>NTDB_id=458112 SA190iCDA_RS01215 WP_070885873.1 263938..264345(-) (pilG) [Pseudomonas argentinensis strain SA190]
MEQHSEGLRVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPEFSPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=458112 SA190iCDA_RS01215 WP_070885873.1 263938..264345(-) (pilG) [Pseudomonas argentinensis strain SA190]
ATGGAACAGCATTCGGAAGGCTTGAGGGTGATGGTGATCGACGACTCGAAGACGATTCGTCGTACAGCGGAAACCCTGCT
GAAAAAGGTGGGCTGTGACGTGATCACCGCTGTGGATGGCTTCGATGCCCTGGCGAAGATCGCCGACACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGTCTCGATGGCTATCAGACCTGTGCGTTGATCAAGAACAACAGTGCCTTCAAG
TCCACGCCCGTTATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGTTCTGATCAATA
CCTGACCAAGCCATTCAGCAAGGAAGAGCTGCTCGGCGCGATCAAGACCCACGTGCCGGAGTTTTCTCCGGTCGAGCAGG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Q9Y6M3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

41.27

93.333

0.385