Detailed information NTG0458065

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: JJF91_RS17100
• Genome accession: NZ_CP067399
• Coordinates: 3504483..3505757 (-)
• Length: 424 a.a.
• NCBI ID: WP_039268318.1
• Uniprot ID: -
• Organism: Escherichia coli strain XJW9B263
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3499483..3510757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JJF91_RS17090 (JJF91_17000)	hupB	3501460..3501732 (-)	273	WP_001043542.1	nucleoid-associated protein HU-beta	-
JJF91_RS17095 (JJF91_17005)	lon	3501941..3504295 (-)	2355	WP_001295325.1	endopeptidase La	-
JJF91_RS17100 (JJF91_17010)	clpX	3504483..3505757 (-)	1275	WP_039268318.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
JJF91_RS17105 (JJF91_17015)	clpP	3505883..3506506 (-)	624	WP_000122253.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
JJF91_RS17110 (JJF91_17020)	tig	3506752..3508050 (-)	1299	WP_001198386.1	trigger factor	-
JJF91_RS17115 (JJF91_17025)	bolA	3508394..3508711 (-)	318	WP_000973448.1	transcriptional regulator BolA	-
JJF91_RS17120 (JJF91_17030)	yajG	3509016..3509594 (+)	579	WP_001295326.1	lipoprotein	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 46302.96 Da
• Isoelectric Point: 4.9280

>NTDB_id=458065 JJF91_RS17100 WP_039268318.1 3504483..3505757(-) (clpX) [Escherichia coli strain XJW9B263]
MTDKRKDGSGKLLYCSFCGKSQHEVCKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIG
QEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT
SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEE
ALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDE
SVIDGQSKPLLIYGKPEAQQASGE

Nucleotide

• Length: 1275 bp

>NTDB_id=458065 JJF91_RS17100 WP_039268318.1 3504483..3505757(-) (clpX) [Escherichia coli strain XJW9B263]
ATGACAGATAAACGCAAAGATGGCTCAGGCAAATTGCTGTATTGCTCTTTTTGCGGCAAAAGCCAGCATGAAGTGTGCAA
GCTGATTGCCGGTCCATCCGTGTATATCTGCGACGAATGTGTTGATTTATGTAACGACATCATTCGCGAAGAGATTAAAG
AAGTTGCACCGCATCGTGAACGCAGTGCGCTACCGACGCCGCATGAAATTCGCAACCACCTGGACGATTACGTTATCGGC
CAGGAACAGGCGAAAAAAGTGCTGGCGGTCGCGGTATACAACCATTACAAACGTCTGCGCAACGGCGATACCAGCAATGG
CGTCGAGTTGGGCAAAAGTAACATTCTGCTGATCGGTCCGACCGGTTCCGGTAAAACGCTGCTGGCTGAAACGCTGGCGC
GCCTGCTGGATGTTCCGTTCACCATGGCCGACGCGACTACACTGACCGAAGCCGGTTATGTGGGTGAAGACGTTGAAAAC
ATCATTCAGAAGCTGTTGCAGAAATGCGACTACGATGTCCAGAAAGCACAGCGTGGTATTGTCTACATCGATGAAATCGA
CAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAAC
TGATCGAAGGTACGGTAGCTGCTGTTCCACCGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACC
TCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTCCGG
CATTGGTTTTGGCGCGACGGTAAAAGCGAAGTCCGACAAAGCAAGCGAAGGCGAGCTGCTGGCGCAGGTTGAACCGGAAG
ATCTGATCAAGTTTGGTCTTATCCCTGAGTTTATTGGTCGTCTGCCGGTTGTCGCAACGTTGAATGAACTGAGCGAAGAA
GCTCTGATTCAGATCCTCAAAGAGCCGAAAAACGCCCTGACCAAGCAGTATCAGGCGCTGTTTAATCTGGAAGGCGTGGA
TCTGGAATTCCGTGACGAGGCGCTGGATGCTATCGCTAAGAAAGCGATGGCGCGTAAAACCGGTGCCCGTGGCCTGCGTT
CCATCGTAGAAGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAG
TCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (13-50)

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.85	94.575	0.566
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.147	96.226	0.531