Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | THTHE16_RS10000 | Genome accession | NC_017272 |
| Coordinates | 1856788..1857096 (+) | Length | 102 a.a. |
| NCBI ID | WP_024119555.1 | Uniprot ID | - |
| Organism | Thermus thermophilus SG0.5JP17-16 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1851788..1862096
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THTHE16_RS09970 (Ththe16_1959) | - | 1852869..1853333 (+) | 465 | WP_014510978.1 | hypothetical protein | - |
| THTHE16_RS09975 (Ththe16_1960) | pfkA | 1853310..1854278 (-) | 969 | WP_014510979.1 | 6-phosphofructokinase | - |
| THTHE16_RS09980 (Ththe16_1961) | rsmI | 1854275..1855069 (-) | 795 | WP_041444954.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| THTHE16_RS09985 (Ththe16_1962) | - | 1855071..1855565 (-) | 495 | WP_014510981.1 | hypothetical protein | - |
| THTHE16_RS09990 (Ththe16_1963) | - | 1855629..1856156 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| THTHE16_RS09995 (Ththe16_1964) | - | 1856189..1856815 (+) | 627 | WP_014510982.1 | YcxB family protein | - |
| THTHE16_RS10000 (Ththe16_1965) | comEA | 1856788..1857096 (+) | 309 | WP_024119555.1 | ComEA family DNA-binding protein | Machinery gene |
| THTHE16_RS10005 (Ththe16_1966) | comA/comEC | 1857093..1859126 (+) | 2034 | WP_014510983.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| THTHE16_RS10010 (Ththe16_1967) | - | 1859114..1859923 (-) | 810 | WP_014510984.1 | ParB/RepB/Spo0J family partition protein | - |
| THTHE16_RS10015 (Ththe16_1968) | soj | 1859907..1860656 (-) | 750 | WP_014510985.1 | chromosome-partitioning ATPase Soj | - |
| THTHE16_RS10020 (Ththe16_1969) | rsmG | 1860650..1861399 (-) | 750 | WP_014510986.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10947.23 Da Isoelectric Point: 10.3435
>NTDB_id=45790 THTHE16_RS10000 WP_024119555.1 1856788..1857096(+) (comEA) [Thermus thermophilus SG0.5JP17-16]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=45790 THTHE16_RS10000 WP_024119555.1 1856788..1857096(+) (comEA) [Thermus thermophilus SG0.5JP17-16]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
100 |
100 |
1 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |