Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HUW50_RS13555 Genome accession   NZ_CP055263
Coordinates   2842091..2842252 (+) Length   53 a.a.
NCBI ID   WP_066337317.1    Uniprot ID   A0A179SR32
Organism   Metabacillus sp. KUDC1714     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2837091..2847252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUW50_RS13530 (HUW50_13530) - 2838260..2838439 (+) 180 WP_066336374.1 YjzC family protein -
  HUW50_RS13535 (HUW50_13535) - 2838518..2838709 (-) 192 WP_066336371.1 YjzD family protein -
  HUW50_RS13540 (HUW50_13540) - 2838960..2839697 (+) 738 WP_066336368.1 alpha/beta fold hydrolase -
  HUW50_RS13545 (HUW50_13545) - 2839916..2840713 (+) 798 WP_066336365.1 NAD(P)-dependent oxidoreductase -
  HUW50_RS13550 (HUW50_13550) med 2840802..2841755 (+) 954 WP_066336362.1 BMP family ABC transporter substrate-binding protein Regulator
  HUW50_RS13555 (HUW50_13555) comZ 2842091..2842252 (+) 162 WP_066337317.1 ComZ family protein Regulator
  HUW50_RS13560 (HUW50_13560) - 2842277..2842576 (-) 300 WP_083964713.1 hypothetical protein -
  HUW50_RS13565 (HUW50_13565) - 2842792..2843724 (+) 933 WP_066336359.1 beta-ketoacyl-ACP synthase III -
  HUW50_RS13570 (HUW50_13570) fabF 2843898..2845139 (+) 1242 WP_066336357.1 beta-ketoacyl-ACP synthase II -
  HUW50_RS13575 (HUW50_13575) - 2845257..2846036 (+) 780 WP_066336354.1 DUF2268 domain-containing protein -
  HUW50_RS13580 (HUW50_13580) - 2846209..2846964 (+) 756 WP_066336351.1 YjbA family protein -

Sequence

Protein


Download         Length: 53 a.a.        Molecular weight: 6104.21 Da        Isoelectric Point: 4.4099

>NTDB_id=457314 HUW50_RS13555 WP_066337317.1 2842091..2842252(+) (comZ) [Metabacillus sp. KUDC1714]
MEFMQIAMKYLPEAKQKLESSGIELSMETIQPMMELFTKVMGEAYELGKKDAQ

Nucleotide


Download         Length: 162 bp        

>NTDB_id=457314 HUW50_RS13555 WP_066337317.1 2842091..2842252(+) (comZ) [Metabacillus sp. KUDC1714]
ATGGAATTTATGCAAATTGCAATGAAGTATTTACCAGAGGCTAAACAAAAGCTAGAAAGTTCAGGTATTGAATTATCGAT
GGAAACTATTCAACCAATGATGGAGCTTTTCACAAAGGTTATGGGAGAGGCTTATGAATTAGGGAAGAAAGACGCGCAAT
AA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A179SR32

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

77.358

100

0.774