Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   HUW50_RS13550 Genome accession   NZ_CP055263
Coordinates   2840802..2841755 (+) Length   317 a.a.
NCBI ID   WP_066336362.1    Uniprot ID   A0A179SQ61
Organism   Metabacillus sp. KUDC1714     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2835802..2846755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUW50_RS13525 (HUW50_13525) argF 2837020..2837964 (+) 945 WP_066336377.1 ornithine carbamoyltransferase -
  HUW50_RS13530 (HUW50_13530) - 2838260..2838439 (+) 180 WP_066336374.1 YjzC family protein -
  HUW50_RS13535 (HUW50_13535) - 2838518..2838709 (-) 192 WP_066336371.1 YjzD family protein -
  HUW50_RS13540 (HUW50_13540) - 2838960..2839697 (+) 738 WP_066336368.1 alpha/beta fold hydrolase -
  HUW50_RS13545 (HUW50_13545) - 2839916..2840713 (+) 798 WP_066336365.1 NAD(P)-dependent oxidoreductase -
  HUW50_RS13550 (HUW50_13550) med 2840802..2841755 (+) 954 WP_066336362.1 BMP family ABC transporter substrate-binding protein Regulator
  HUW50_RS13555 (HUW50_13555) comZ 2842091..2842252 (+) 162 WP_066337317.1 ComZ family protein Regulator
  HUW50_RS13560 (HUW50_13560) - 2842277..2842576 (-) 300 WP_083964713.1 hypothetical protein -
  HUW50_RS13565 (HUW50_13565) - 2842792..2843724 (+) 933 WP_066336359.1 beta-ketoacyl-ACP synthase III -
  HUW50_RS13570 (HUW50_13570) fabF 2843898..2845139 (+) 1242 WP_066336357.1 beta-ketoacyl-ACP synthase II -
  HUW50_RS13575 (HUW50_13575) - 2845257..2846036 (+) 780 WP_066336354.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35196.86 Da        Isoelectric Point: 4.3499

>NTDB_id=457313 HUW50_RS13550 WP_066336362.1 2840802..2841755(+) (med) [Metabacillus sp. KUDC1714]
MYKKLGLVLILLFSLFGCGQPTAQGKLQKVGLLVPETIDDQVWGTKGYMGLLKIQSELKVDVFYKEGVNNESKIRAAIDE
FKQNDVNLVFGHGSEYANFFNTISSEYPDIHFVLFNGKADGKNVTSLNFKSNAMGFFGGMVAGEMSKSDKVGVLAAFEWQ
PEVDGFFEGAYYQNENVHVEIQYVQDWNDTSIAIPLLNEMIKNGVDIVYVAGDGYNVSVIERLKEEGLYAIGFVSDQSDL
GKGTVLTSTVQHVDVLYEVVANSFNKGELESGELFFDFQDGVISLGKFSPLVDKEFQASLKDQIEEYKKTGLLPNQL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=457313 HUW50_RS13550 WP_066336362.1 2840802..2841755(+) (med) [Metabacillus sp. KUDC1714]
ATGTACAAAAAGCTCGGTCTTGTCCTTATTTTACTTTTTTCGCTTTTCGGTTGTGGACAACCTACAGCACAAGGGAAACT
TCAAAAGGTAGGTCTGCTTGTACCTGAAACCATTGATGATCAAGTTTGGGGAACGAAGGGCTATATGGGCCTTCTTAAAA
TTCAATCTGAGCTAAAGGTTGATGTATTTTATAAAGAAGGAGTGAATAATGAGAGCAAAATTCGTGCTGCAATTGATGAA
TTTAAGCAAAATGATGTGAATCTTGTCTTCGGTCATGGAAGTGAATATGCTAACTTTTTTAATACGATCAGTAGTGAATA
TCCTGACATCCATTTCGTGCTATTTAATGGGAAAGCTGACGGAAAAAATGTTACGAGCTTAAATTTTAAGTCAAATGCAA
TGGGGTTTTTTGGTGGTATGGTTGCAGGGGAAATGTCAAAGTCTGATAAAGTTGGTGTTTTAGCGGCCTTTGAGTGGCAA
CCTGAGGTAGATGGCTTTTTTGAAGGAGCCTATTATCAAAATGAAAATGTCCATGTAGAAATTCAATATGTGCAAGACTG
GAATGATACATCGATTGCTATTCCACTTCTTAATGAAATGATCAAAAATGGTGTTGACATCGTGTATGTAGCTGGAGATG
GATATAATGTTTCAGTCATTGAAAGACTAAAAGAGGAAGGCTTGTACGCAATTGGTTTTGTATCCGACCAATCTGATTTA
GGAAAAGGTACGGTGTTAACAAGTACCGTTCAACATGTTGATGTCTTATATGAGGTTGTAGCAAATTCCTTTAATAAAGG
TGAGCTTGAAAGTGGAGAATTATTTTTTGATTTTCAGGACGGCGTGATTTCTCTAGGGAAGTTTAGTCCTCTTGTAGACA
AAGAATTTCAAGCATCGCTTAAAGACCAAATCGAAGAATATAAAAAAACTGGACTACTGCCAAATCAATTATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A179SQ61

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

54.459

99.054

0.539