Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HUW35_RS05490 Genome accession   NZ_CP055157
Coordinates   1311123..1311518 (-) Length   131 a.a.
NCBI ID   WP_010132439.1    Uniprot ID   A0A7H8PW51
Organism   Microbulbifer sp. YPW1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1306123..1316518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUW35_RS05475 (HUW35_05480) - 1307534..1309714 (-) 2181 WP_181254616.1 methyl-accepting chemotaxis protein -
  HUW35_RS05480 (HUW35_05485) - 1309971..1310513 (-) 543 WP_181254617.1 chemotaxis protein CheW -
  HUW35_RS05485 (HUW35_05490) pilH 1310532..1310894 (-) 363 WP_181254618.1 twitching motility response regulator PilH -
  HUW35_RS05490 (HUW35_05495) pilG 1311123..1311518 (-) 396 WP_010132439.1 twitching motility response regulator PilG Regulator
  HUW35_RS05495 (HUW35_05500) gshB 1311899..1312855 (+) 957 WP_181254619.1 glutathione synthase -
  HUW35_RS05500 (HUW35_05505) - 1312950..1313891 (+) 942 WP_181254620.1 energy transducer TonB -
  HUW35_RS05505 (HUW35_05510) - 1313951..1314535 (+) 585 WP_181254621.1 YqgE/AlgH family protein -
  HUW35_RS05510 (HUW35_05515) ruvX 1314545..1314973 (+) 429 WP_181254622.1 Holliday junction resolvase RuvX -
  HUW35_RS05515 (HUW35_05520) hemC 1315039..1315974 (+) 936 WP_181254623.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14316.55 Da        Isoelectric Point: 7.2147

>NTDB_id=456437 HUW35_RS05490 WP_010132439.1 1311123..1311518(-) (pilG) [Microbulbifer sp. YPW1]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCAVVTATDGFDALAKIADSRPDIIFVDIMMPRLDGYQTCALIKNNSEFR
STPVVMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=456437 HUW35_RS05490 WP_010132439.1 1311123..1311518(-) (pilG) [Microbulbifer sp. YPW1]
ATGGAACTCAACTGGGAAAGTCTCACCGTGATGGTGATTGACGACAGTAAAACCATTCGTCGCACCGCGGAAACGCTGCT
GCAAAAAGCGGGTTGTGCGGTTGTGACTGCTACCGATGGTTTCGATGCGCTGGCGAAAATCGCCGATTCGCGCCCGGATA
TCATCTTTGTGGATATCATGATGCCCCGCCTGGATGGATATCAGACCTGTGCGCTGATCAAGAACAACAGCGAATTCCGC
AGCACGCCGGTGGTGATGCTGTCTAGTAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGCGTTGTGGGCTGCGATCAGTA
CCTCACCAAGCCGTTCAGCAAGAGCGAACTGTTGGGCGCAATTTCCGCACACGCCAAGCCGCATCACGCCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8PW51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

94.656

0.702
  vicR Streptococcus mutans UA159

41.026

89.313

0.366