Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | G148_RS07155 | Genome accession | NC_020125 |
| Coordinates | 1512324..1512932 (-) | Length | 202 a.a. |
| NCBI ID | WP_004919077.1 | Uniprot ID | E4T8W1 |
| Organism | Riemerella anatipestifer RA-CH-2 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1507324..1517932
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G148_RS07135 (G148_1421) | - | 1507548..1508861 (+) | 1314 | WP_004919072.1 | M16 family metallopeptidase | - |
| G148_RS07140 (G148_1422) | - | 1508874..1510916 (+) | 2043 | WP_004919073.1 | M16 family metallopeptidase | - |
| G148_RS07145 (G148_1423) | secG | 1511059..1511421 (+) | 363 | WP_004919074.1 | preprotein translocase subunit SecG | - |
| G148_RS07150 (G148_1424) | - | 1511460..1512317 (-) | 858 | WP_004919075.1 | glycosyltransferase family 2 protein | - |
| G148_RS07155 (G148_1425) | recR | 1512324..1512932 (-) | 609 | WP_004919077.1 | recombination mediator RecR | Machinery gene |
| G148_RS07160 (G148_1426) | - | 1513245..1517291 (-) | 4047 | WP_004919078.1 | S8 family serine peptidase | - |
| G148_RS10435 (G148_1427) | - | 1517270..1517680 (-) | 411 | WP_004919080.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 22424.76 Da Isoelectric Point: 4.9891
>NTDB_id=45614 G148_RS07155 WP_004919077.1 1512324..1512932(-) (recR) [Riemerella anatipestifer RA-CH-2]
MNFPSKVLEKAVEEISGLPGIGRKSALRLALHLLRQPSSQGLALGDAIQNLVTEIKYCKECHNFSDTDICEICADDSRHA
ELLCVVEDVRDVMAIENTGKFKGKYLVLGGKISPMEGIGPQQLNIETLESKLEIGEIEEVIFALSATMEGDTTVYYLYKK
FKHFDIKFSNIARGISVGDELEYADEVSLGRSILNRIPYKGH
MNFPSKVLEKAVEEISGLPGIGRKSALRLALHLLRQPSSQGLALGDAIQNLVTEIKYCKECHNFSDTDICEICADDSRHA
ELLCVVEDVRDVMAIENTGKFKGKYLVLGGKISPMEGIGPQQLNIETLESKLEIGEIEEVIFALSATMEGDTTVYYLYKK
FKHFDIKFSNIARGISVGDELEYADEVSLGRSILNRIPYKGH
Nucleotide
Download Length: 609 bp
>NTDB_id=45614 G148_RS07155 WP_004919077.1 1512324..1512932(-) (recR) [Riemerella anatipestifer RA-CH-2]
ATGAATTTTCCAAGTAAGGTTTTAGAAAAAGCAGTAGAAGAAATATCAGGTCTCCCAGGGATAGGCAGAAAGTCGGCTCT
CAGACTAGCGCTTCATTTGCTTAGACAACCGAGTTCACAAGGATTAGCTCTAGGCGATGCTATACAAAATCTAGTTACAG
AGATAAAATATTGTAAAGAATGCCATAACTTTTCGGACACAGATATTTGCGAAATTTGTGCAGATGACAGTAGACACGCT
GAACTCCTATGCGTTGTGGAAGATGTGAGAGATGTAATGGCGATAGAAAACACAGGAAAATTCAAAGGAAAATATTTGGT
TTTAGGAGGAAAAATATCGCCTATGGAAGGTATTGGACCTCAACAATTAAATATAGAAACTTTAGAAAGCAAACTAGAAA
TAGGGGAGATAGAGGAGGTTATTTTTGCACTATCTGCCACTATGGAGGGCGATACCACCGTGTATTATTTGTATAAAAAG
TTTAAGCATTTTGACATTAAATTCTCCAATATTGCGAGAGGGATTTCCGTAGGAGATGAACTAGAGTACGCCGATGAAGT
TTCTTTGGGGAGGTCTATTTTGAACCGAATACCTTATAAAGGTCATTAA
ATGAATTTTCCAAGTAAGGTTTTAGAAAAAGCAGTAGAAGAAATATCAGGTCTCCCAGGGATAGGCAGAAAGTCGGCTCT
CAGACTAGCGCTTCATTTGCTTAGACAACCGAGTTCACAAGGATTAGCTCTAGGCGATGCTATACAAAATCTAGTTACAG
AGATAAAATATTGTAAAGAATGCCATAACTTTTCGGACACAGATATTTGCGAAATTTGTGCAGATGACAGTAGACACGCT
GAACTCCTATGCGTTGTGGAAGATGTGAGAGATGTAATGGCGATAGAAAACACAGGAAAATTCAAAGGAAAATATTTGGT
TTTAGGAGGAAAAATATCGCCTATGGAAGGTATTGGACCTCAACAATTAAATATAGAAACTTTAGAAAGCAAACTAGAAA
TAGGGGAGATAGAGGAGGTTATTTTTGCACTATCTGCCACTATGGAGGGCGATACCACCGTGTATTATTTGTATAAAAAG
TTTAAGCATTTTGACATTAAATTCTCCAATATTGCGAGAGGGATTTCCGTAGGAGATGAACTAGAGTACGCCGATGAAGT
TTCTTTGGGGAGGTCTATTTTGAACCGAATACCTTATAAAGGTCATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
41.837 |
97.03 |
0.406 |
| recR | Streptococcus pneumoniae R6 |
40.306 |
97.03 |
0.391 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
39.286 |
97.03 |
0.381 |