Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | JFL57_RS02130 | Genome accession | NZ_CP066565 |
| Coordinates | 460104..461447 (+) | Length | 447 a.a. |
| NCBI ID | WP_075294325.1 | Uniprot ID | A0A9Q7E728 |
| Organism | Histophilus somni strain ASc-MMNZ-VFA-076 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 455104..466447
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFL57_RS02105 (JFL57_02105) | - | 455604..456275 (-) | 672 | WP_011608565.1 | trimeric intracellular cation channel family protein | - |
| JFL57_RS02110 (JFL57_02110) | - | 456436..457023 (-) | 588 | WP_011608566.1 | thymidine kinase | - |
| JFL57_RS02115 (JFL57_02115) | tsaD | 457085..458113 (-) | 1029 | WP_011608567.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| JFL57_RS02120 (JFL57_02120) | dprA | 458349..459455 (+) | 1107 | WP_075294326.1 | DNA-processing protein DprA | Machinery gene |
| JFL57_RS02125 (JFL57_02125) | rsmD | 459438..460040 (-) | 603 | WP_011608569.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| JFL57_RS02130 (JFL57_02130) | pilA | 460104..461447 (+) | 1344 | WP_075294325.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| JFL57_RS02135 (JFL57_02135) | murJ | 461610..463181 (-) | 1572 | WP_075294324.1 | murein biosynthesis integral membrane protein MurJ | - |
| JFL57_RS02140 (JFL57_02140) | rpsT | 463459..463722 (+) | 264 | WP_011608572.1 | 30S ribosomal protein S20 | - |
| JFL57_RS02145 (JFL57_02145) | typA | 463784..465633 (-) | 1850 | Protein_413 | translational GTPase TypA | - |
Sequence
Protein
Download Length: 447 a.a. Molecular weight: 49779.30 Da Isoelectric Point: 4.5030
>NTDB_id=455559 JFL57_RS02130 WP_075294325.1 460104..461447(+) (pilA) [Histophilus somni strain ASc-MMNZ-VFA-076]
MSEEKKKGRFWSWLGLGQKTEDPISEQQPEQQSGQQESVASEQESTSNIEQVIKEPEHIDDTSSDLVLSAHLQEQEVKEY
SLHERELSQNTVIEIESAVEKTDIFIEEDTTYQAINKEQREETTITSVKEVIPQEQEKPAENGFFSRLVKGLLKTKQNIG
IGFRSLFLGKKIDDELFEELEEQLLIADIGVPTTTKIINNLIQHASRKQLQEADLLYQQLKVELADILKPVEQPLQLDNS
KKPYVILMVGVNGVGKTTTIGKLANQFQRQGKSVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQSTGSDSASVIFDAMQS
AVARNIDVLIADTAGRLQNKNNLMDELKKIVRVIKKCDKTAPHEIMLTLDSGTGQNAISQAKLFNEAVGLTGISLTKLDG
TAKGGVIFAIADQFNLPIRYIGVGEKIDDLRPFQADEFIDALFVQEE
MSEEKKKGRFWSWLGLGQKTEDPISEQQPEQQSGQQESVASEQESTSNIEQVIKEPEHIDDTSSDLVLSAHLQEQEVKEY
SLHERELSQNTVIEIESAVEKTDIFIEEDTTYQAINKEQREETTITSVKEVIPQEQEKPAENGFFSRLVKGLLKTKQNIG
IGFRSLFLGKKIDDELFEELEEQLLIADIGVPTTTKIINNLIQHASRKQLQEADLLYQQLKVELADILKPVEQPLQLDNS
KKPYVILMVGVNGVGKTTTIGKLANQFQRQGKSVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQSTGSDSASVIFDAMQS
AVARNIDVLIADTAGRLQNKNNLMDELKKIVRVIKKCDKTAPHEIMLTLDSGTGQNAISQAKLFNEAVGLTGISLTKLDG
TAKGGVIFAIADQFNLPIRYIGVGEKIDDLRPFQADEFIDALFVQEE
Nucleotide
Download Length: 1344 bp
>NTDB_id=455559 JFL57_RS02130 WP_075294325.1 460104..461447(+) (pilA) [Histophilus somni strain ASc-MMNZ-VFA-076]
ATGTCAGAAGAAAAGAAAAAAGGTAGATTTTGGTCTTGGTTAGGATTGGGGCAGAAAACAGAAGATCCGATATCAGAACA
GCAACCGGAGCAACAATCAGGACAACAGGAAAGTGTTGCAAGCGAGCAAGAATCTACTTCGAATATAGAGCAGGTTATAA
AAGAACCAGAGCATATTGATGACACTTCATCAGACTTGGTTTTATCCGCTCATTTACAGGAGCAAGAGGTAAAAGAATAC
TCACTTCATGAACGGGAACTGTCTCAAAATACTGTAATAGAAATAGAAAGTGCGGTTGAAAAAACAGATATTTTTATTGA
AGAGGATACAACATATCAGGCTATCAATAAGGAGCAGCGAGAGGAAACAACGATTACATCGGTTAAAGAAGTAATACCGC
AAGAACAAGAAAAACCGGCTGAAAATGGTTTTTTTAGTCGTTTAGTCAAAGGATTATTAAAAACCAAGCAAAATATCGGT
ATCGGTTTCCGCAGTTTGTTTTTGGGCAAGAAAATTGATGACGAGTTATTTGAGGAGTTAGAAGAACAACTATTGATCGC
TGATATCGGTGTGCCAACTACGACAAAAATCATCAATAATTTAATTCAGCATGCAAGCCGTAAACAATTGCAAGAGGCAG
ATTTACTTTATCAACAACTTAAAGTGGAATTAGCCGATATTTTAAAACCGGTCGAGCAACCTTTACAACTTGATAACAGT
AAAAAACCTTATGTTATCTTGATGGTTGGTGTAAATGGTGTGGGTAAAACCACTACAATCGGCAAATTGGCTAATCAATT
CCAAAGGCAAGGCAAATCCGTTATGTTGGCGGCAGGAGATACGTTCCGTGCTGCGGCTGTTGAGCAGCTTCAAGTTTGGG
GAGAACGTAACCAGATTCCTGTTATTGCACAAAGTACAGGTTCAGATTCTGCTTCTGTCATTTTTGATGCTATGCAATCG
GCAGTGGCACGTAATATTGATGTGCTTATTGCGGATACGGCTGGGCGTTTGCAGAATAAAAATAACCTGATGGATGAGTT
GAAAAAAATTGTTCGTGTGATAAAAAAATGTGATAAAACAGCACCGCATGAAATCATGCTAACTCTTGATAGTGGGACGG
GACAAAATGCAATTAGTCAAGCGAAATTGTTCAATGAAGCGGTAGGATTAACGGGTATTAGTCTAACCAAGTTGGATGGA
ACAGCAAAAGGCGGTGTTATTTTTGCGATTGCAGATCAATTTAATTTACCTATTCGCTATATTGGTGTCGGTGAGAAAAT
CGATGATTTACGCCCATTCCAAGCAGATGAATTTATTGACGCACTTTTTGTACAAGAAGAGTAA
ATGTCAGAAGAAAAGAAAAAAGGTAGATTTTGGTCTTGGTTAGGATTGGGGCAGAAAACAGAAGATCCGATATCAGAACA
GCAACCGGAGCAACAATCAGGACAACAGGAAAGTGTTGCAAGCGAGCAAGAATCTACTTCGAATATAGAGCAGGTTATAA
AAGAACCAGAGCATATTGATGACACTTCATCAGACTTGGTTTTATCCGCTCATTTACAGGAGCAAGAGGTAAAAGAATAC
TCACTTCATGAACGGGAACTGTCTCAAAATACTGTAATAGAAATAGAAAGTGCGGTTGAAAAAACAGATATTTTTATTGA
AGAGGATACAACATATCAGGCTATCAATAAGGAGCAGCGAGAGGAAACAACGATTACATCGGTTAAAGAAGTAATACCGC
AAGAACAAGAAAAACCGGCTGAAAATGGTTTTTTTAGTCGTTTAGTCAAAGGATTATTAAAAACCAAGCAAAATATCGGT
ATCGGTTTCCGCAGTTTGTTTTTGGGCAAGAAAATTGATGACGAGTTATTTGAGGAGTTAGAAGAACAACTATTGATCGC
TGATATCGGTGTGCCAACTACGACAAAAATCATCAATAATTTAATTCAGCATGCAAGCCGTAAACAATTGCAAGAGGCAG
ATTTACTTTATCAACAACTTAAAGTGGAATTAGCCGATATTTTAAAACCGGTCGAGCAACCTTTACAACTTGATAACAGT
AAAAAACCTTATGTTATCTTGATGGTTGGTGTAAATGGTGTGGGTAAAACCACTACAATCGGCAAATTGGCTAATCAATT
CCAAAGGCAAGGCAAATCCGTTATGTTGGCGGCAGGAGATACGTTCCGTGCTGCGGCTGTTGAGCAGCTTCAAGTTTGGG
GAGAACGTAACCAGATTCCTGTTATTGCACAAAGTACAGGTTCAGATTCTGCTTCTGTCATTTTTGATGCTATGCAATCG
GCAGTGGCACGTAATATTGATGTGCTTATTGCGGATACGGCTGGGCGTTTGCAGAATAAAAATAACCTGATGGATGAGTT
GAAAAAAATTGTTCGTGTGATAAAAAAATGTGATAAAACAGCACCGCATGAAATCATGCTAACTCTTGATAGTGGGACGG
GACAAAATGCAATTAGTCAAGCGAAATTGTTCAATGAAGCGGTAGGATTAACGGGTATTAGTCTAACCAAGTTGGATGGA
ACAGCAAAAGGCGGTGTTATTTTTGCGATTGCAGATCAATTTAATTTACCTATTCGCTATATTGGTGTCGGTGAGAAAAT
CGATGATTTACGCCCATTCCAAGCAGATGAATTTATTGACGCACTTTTTGTACAAGAAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
50.151 |
74.049 |
0.371 |