Detailed information NTG0045472

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BSNT_RS06255
• Genome accession: NC_017196
• Coordinates: 1198548..1199501 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto BEST195
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1193548..1204501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSNT_RS06220 (BSNT_01885)	argF	1194090..1195049 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
BSNT_RS06235 (BSNT_01888)	yjzC	1196425..1196604 (+)	180	WP_003245356.1	YjzC family protein	-
BSNT_RS06240	yjzD	1196650..1196835 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
BSNT_RS06245 (BSNT_01890)	-	1197084..1197818 (+)	735	WP_014479433.1	hypothetical protein	-
BSNT_RS06250 (BSNT_01892)	-	1197900..1198457 (+)	558	WP_014479435.1	hypothetical protein	-
BSNT_RS06255 (BSNT_01894)	med	1198548..1199501 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
BSNT_RS06260 (BSNT_01896)	comZ	1199516..1199707 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
BSNT_RS06265 (BSNT_01897)	yjzB	1199737..1199964 (-)	228	WP_031600361.1	spore coat protein YjzB	-
BSNT_RS06270 (BSNT_01898)	fabH	1200129..1201067 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
BSNT_RS06275 (BSNT_01899)	fabF	1201090..1202331 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
BSNT_RS06280 (BSNT_01900)	yjaZ	1202407..1203192 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
BSNT_RS06285 (BSNT_01903)	appD	1203384..1204370 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=45472 BSNT_RS06255 WP_014479436.1 1198548..1199501(+) (med) [Bacillus subtilis subsp. natto BEST195]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=45472 BSNT_RS06255 WP_014479436.1 1198548..1199501(+) (med) [Bacillus subtilis subsp. natto BEST195]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994