Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   I33_RS02105 Genome accession   NC_017195
Coordinates   423720..424670 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis subsp. subtilis str. RO-NN-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418720..429670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I33_RS02080 (I33_0430) rapC 420180..421328 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  I33_RS02085 (I33_0431) phrC 421312..421434 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  I33_RS20000 (I33_0432) yczM 421534..421623 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  I33_RS20005 (I33_0433) yczN 421705..421818 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  I33_RS02100 (I33_0434) thrD 421971..423335 (-) 1365 WP_014475802.1 aspartate kinase -
  I33_RS02105 (I33_0436) ceuB 423720..424670 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  I33_RS02110 (I33_0437) yclO 424663..425610 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  I33_RS02115 (I33_0438) yclP 425604..426362 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  I33_RS02120 (I33_0439) yclQ 426384..427337 (+) 954 WP_014475807.1 petrobactin ABC transporter substrate-binding protein YclQ -
  I33_RS02125 (I33_0440) - 427567..428499 (+) 933 WP_014475808.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=45384 I33_RS02105 WP_014475804.1 423720..424670(+) (ceuB) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=45384 I33_RS02105 WP_014475804.1 423720..424670(+) (ceuB) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTCTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTAGGTTTAATTATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment