Detailed information NTG0453829

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6I02_RS10455
• Genome accession: NZ_CP066093
• Coordinates: 2242315..2243415 (-)
• Length: 366 a.a.
• NCBI ID: WP_198463571.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain FDAARGOS_1045
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2237315..2248415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I02_RS10440 (I6I02_10440)	-	2238149..2239021 (-)	873	WP_049545979.1	YitT family protein	-
I6I02_RS10445 (I6I02_10445)	trpS	2239451..2240473 (+)	1023	WP_037599375.1	tryptophan--tRNA ligase	-
I6I02_RS10450 (I6I02_10450)	guaB	2240652..2242133 (+)	1482	WP_021144763.1	IMP dehydrogenase	-
I6I02_RS10455 (I6I02_10455)	recF	2242315..2243415 (-)	1101	WP_198463571.1	DNA replication/repair protein RecF	Machinery gene
I6I02_RS10460 (I6I02_10460)	yaaA	2243418..2243795 (-)	378	WP_198463572.1	S4 domain-containing protein YaaA	-
I6I02_RS10465 (I6I02_10465)	yfmF	2243873..2245123 (+)	1251	WP_198463573.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6I02_RS10470 (I6I02_10470)	yfmH	2245125..2246402 (+)	1278	WP_198463574.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6I02_RS10475 (I6I02_10475)	-	2246461..2247318 (+)	858	WP_198463575.1	helix-turn-helix domain-containing protein	-
I6I02_RS10480 (I6I02_10480)	pgsA	2247331..2247873 (+)	543	WP_049545986.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42004.08 Da
• Isoelectric Point: 8.1780

>NTDB_id=453829 I6I02_RS10455 WP_198463571.1 2242315..2243415(-) (recF) [Streptococcus salivarius strain FDAARGOS_1045]
MWLENIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELIQFQQNTLKLNGIVHRHSGK
LPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQR
NAYLKSTDNVDINFLSVLDEQLSDFGARVIEHRLEFIKQLEEEADGHHSNLSNQIERLKISYESNIPFGNNKVIRESFLT
TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTGEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSKLPPDLKTFLVKNGIICEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=453829 I6I02_RS10455 WP_198463571.1 2242315..2243415(-) (recF) [Streptococcus salivarius strain FDAARGOS_1045]
ATGTGGCTCGAAAATATTGATATTCAACACTTTAGAAATTATACTGAAGCCTCTGTGAGCTTCTCACCTCATCTCAATAT
TTTTCTTGGTCGCAATGCTCAAGGAAAAACAAATATTCTTGAGGCCATCTATTTTCTAGCATTGACACGCAGTCATCGGA
CCCGTTCAGATAAGGAACTGATTCAATTTCAGCAAAATACTCTCAAACTGAACGGCATCGTGCATCGTCATAGTGGAAAG
CTACCTCTGGAAATCAGTTTATCTAATAAAGGCCGCATAACAAAGGTCAACCACCTCAAACAAGCTAAATTATCCGATTA
TATCGGTCACATGACAGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAGGGATCTCCAAGCCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTTTCAGACCTATCAAGTTATAATCATGTACTCAAGCAACGT
AATGCCTATCTCAAATCTACTGACAATGTAGACATTAATTTTCTCTCAGTATTAGATGAACAGCTTTCCGATTTTGGAGC
ACGCGTTATCGAACATAGACTAGAATTTATCAAGCAATTAGAGGAAGAGGCAGATGGACATCATAGTAATCTCTCAAATC
AGATAGAGCGCCTTAAAATCTCCTACGAATCTAATATCCCATTCGGGAATAACAAAGTTATTCGTGAATCATTTTTAACC
ACGTTAAAGCAAAATCACAAAAGGGATATCTTCAAAAAGAACACTGGTGTTGGTCCACATAGGGATGATTTGACATTTTA
CATTAATGACATGAACGCATCTTTCGGCAGTCAGGGGCAACAACGTAGTCTCATTCTTTCTTTAAAAATGGCTGAGATTG
CTCTGATAAAAAAAGTAACAGGTGAATTTCCAATTCTTCTCCTCGATGATGTCATGAGTGAGCTTGACAATCACCGTCAA
CTCAAACTGTTAGAAAGTATTGACGAAGAGGTTCAAACCTTCATGACGACAACTTCACTTGATCATCTGAGTAAGCTACC
ACCCGATTTAAAGACCTTCTTAGTCAAGAATGGTATTATTTGTGAAAAACAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-345)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.804	97.814	0.634
recF	Bacillus subtilis subsp. subtilis str. 168	43.935	100	0.445