Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   I6I02_RS00640 Genome accession   NZ_CP066093
Coordinates   121953..124301 (-) Length   782 a.a.
NCBI ID   WP_198463613.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 116953..129301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS00620 (I6I02_00620) lepB 119148..119771 (-) 624 WP_013991198.1 signal peptidase I -
  I6I02_RS00625 (I6I02_00625) rnhC 119790..120680 (-) 891 WP_060972421.1 ribonuclease HIII -
  I6I02_RS00630 (I6I02_00630) zapA 120997..121311 (+) 315 WP_004183554.1 cell division protein ZapA -
  I6I02_RS00635 (I6I02_00635) - 121308..121850 (+) 543 WP_070654666.1 CvpA family protein -
  I6I02_RS00640 (I6I02_00640) mutS/mutS2 121953..124301 (-) 2349 WP_198463613.1 endonuclease MutS2 Machinery gene
  I6I02_RS00645 (I6I02_00645) polA 124533..127172 (+) 2640 WP_198463614.1 DNA polymerase I -
  I6I02_RS00650 (I6I02_00650) - 127588..128688 (+) 1101 WP_198463615.1 DUF6287 domain-containing protein -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87617.93 Da        Isoelectric Point: 6.5524

>NTDB_id=453726 I6I02_RS00640 WP_198463613.1 121953..124301(-) (mutS/mutS2) [Streptococcus salivarius strain FDAARGOS_1045]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELIALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPLAAAIANNAWILGHMDFIRGKYLYLHDKKAVIPKISDNQTLQLLNVRHPLLANPVANDLHFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQTKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKTSGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=453726 I6I02_RS00640 WP_198463613.1 121953..124301(-) (mutS/mutS2) [Streptococcus salivarius strain FDAARGOS_1045]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTGCGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATTCAAGAAATGG
CTGAGATTTTCGTAGAGCACCATGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAGCCCTTGCGTCGCTTGGAACTA
GATGCTGACCTCAACATCCAGGAACTCATTGCCATCAAGAAGGTGCTACAAGCTTCTGCTGACCTTGGTCGCTTTTACGC
TGACCTTGAAAATGTAGAGCTCATCGCCCTTAAACGTCTTTTCGAAAAGATTGAAGCCTTCCCAAGTCTACAAGGCAGTC
TTCAGAGCATCAATGACGGTGGTTTTATTGAGCATTTTGCTAGCCCAGAGTTGCAAAACATCCGTCGTCAACTCAAATCT
TGTGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAGAAATCTGGTCACATGTTGGCTGAAAGTTTGATTGCTAG
TCGTAACGGCCGTTCGGTGCTTCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGAGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTATATATCGAGCCACGTGCCGTTATCCAGCTTAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CACGAGATGGCTCGTATCCTGCATGAACTGTCTGATCAACTCCGTCCACTGGCTGCTGCAATTGCCAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATATCTCTATCTCCATGATAAAAAAGCGGTTATTCCAAAGATTAGTGACA
ACCAAACACTACAACTACTTAACGTTCGTCACCCTCTTTTGGCCAATCCTGTAGCCAACGATTTGCACTTTGATGAGGAC
CTCACGGCCATTGTCATCACAGGTCCCAATACTGGTGGTAAAACGGTCATGCTTAAAACGCTAGGACTAGCACAACTAAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGCAGCCGTGTCGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ACGAACAGTCTATCGAACAAAGTTTGTCAACTTTCTCTAGTCACATGACCCACATTGTTGAGATTCTGAATGCTGCCGAC
AGTAACAGCCTGGTCTTGGTCGATGAGCTTGGGGCTGGTACCGACCCTCAGGAAGGAGCTAGTCTAGCCATGGCAATCTT
AGAGCACCTCCGTTTAAGTCAGATTAAGACCATGGCTACCACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAAGGGGTTCCTGGT
CGTTCTAATGCCTTTGAAATTGCTCGACGCCTCGGTTTGAATGAGATTATTGTCAAGGAAGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTGGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAAAAACTCTATAACGAATTCTCCCATGAATACGACAAGGAA
CTCGAAAAGGCTCAAAAAGAAATTCAAGAGATGGTTGATACCGCTTTGGCTGAGAGCGATAGTATCCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTGCCCCACAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCTAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTTGGAGATGATATCATCGTTACC
GCCTATGGGCAACGGGGTACCCTTACCAGTCAAACCAAAAATGGTAACTGGGAAGCTCAGGTCGGTCTCATCAAGATGAC
CCTCAAGGCAGACGAATTCACTCTGGTTCGTGCCCAAGCTGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAGAAGACATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCCGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.596

100

0.402