Detailed information NTG0453726

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: HT135_RS13830
• Genome accession: NZ_CP054584
• Coordinates: 2688880..2691210 (-)
• Length: 776 a.a.
• NCBI ID: WP_106020344.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain KKD1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2683880..2696210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HT135_RS13795 (HT135_13790)	-	2684220..2684558 (-)	339	WP_101864551.1	YqxA family protein	-
HT135_RS13800 (HT135_13795)	spoIIP	2684575..2685780 (-)	1206	WP_095713315.1	spore autolysin SpoIIP	-
HT135_RS13805 (HT135_13800)	gpr	2685843..2686949 (-)	1107	WP_044154490.1	GPR endopeptidase	-
HT135_RS13810 (HT135_13805)	rpsT	2687153..2687419 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
HT135_RS13815 (HT135_13810)	holA	2687434..2688477 (-)	1044	WP_106020122.1	DNA polymerase III subunit delta	-
HT135_RS13820 (HT135_13815)	-	2688517..2688666 (-)	150	WP_003229985.1	hypothetical protein	-
HT135_RS13825 (HT135_13820)	-	2688707..2688841 (+)	135	WP_010335005.1	YqzM family protein	-
HT135_RS13830 (HT135_13825)	comEC	2688880..2691210 (-)	2331	WP_106020344.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
HT135_RS13835 (HT135_13830)	-	2691214..2691783 (-)	570	WP_010335007.1	ComE operon protein 2	-
HT135_RS13840 (HT135_13835)	comEA	2691850..2692467 (-)	618	WP_106020123.1	helix-hairpin-helix domain-containing protein	Machinery gene
HT135_RS13845 (HT135_13840)	comER	2692551..2693372 (+)	822	WP_024122113.1	late competence protein ComER	-
HT135_RS13850 (HT135_13845)	-	2693437..2694180 (-)	744	WP_106020124.1	class I SAM-dependent DNA methyltransferase	-
HT135_RS13855 (HT135_13850)	rsfS	2694177..2694533 (-)	357	WP_024122115.1	ribosome silencing factor	-
HT135_RS13860 (HT135_13855)	yqeK	2694551..2695111 (-)	561	WP_106020125.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
HT135_RS13865 (HT135_13860)	-	2695101..2695670 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
HT135_RS13870 (HT135_13865)	yhbY	2695681..2695971 (-)	291	WP_106020126.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86245.52 Da
• Isoelectric Point: 8.0373

>NTDB_id=453726 HT135_RS13830 WP_106020344.1 2688880..2691210(-) (comEC) [Bacillus halotolerans strain KKD1]
MRNSRLLLPLAAASATAGIAAASYFSAVFLFFLSLLIVSTKTRHAPLIFVCLFSFVLNFALFKITDSQNTSSYQQGSYHF
KAVIHSIPKIEGDRMSMLIKTPDGEKWAASYRIQSLAEKDKLSHLEPGMACELTGALEKPKQATVPGTFDYQQYLYRQHI
HWSYSVTSIGNCSEPSGVRYKLLSLRKYIVSFTNTQLPPDSAGIVQALTVGERSYLDDDVLNAYQSLGVVHLLAISGLHI
GILTAGLFYAMIRLGITRENASILLLLFLPIYVILTGAAPSVLRAALMSGIYLAGSLFQQRVNSAGVICLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFQHIKTSLGQLTIVSVIAQLGSLPILLYHFQQFPIISIPMNMVLVPFYTFCILPAA
IIGVILLFFSASVGQFLFYWFDVMMTWINRLITKIADIEIFTIIISRPAPALLLLFTLTVIILLMSIEKPSFPRLTVSTG
LFCATLILLFVFPYVSSEGEVDMIDIGQGDSMFVSAPYQKGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEVLLKHHKVKRLIIPKGFVSEPHDEKVLRTARQEGVAIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGRISWLLTGDLEKEGEQEVIDVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAVISAGEN
NRYHHPHQEVLQLLKSRFIRVLRTDQSGTIQYTYKSGSGTFSVYPPYDTSDMTETN

Nucleotide

• Length: 2331 bp

>NTDB_id=453726 HT135_RS13830 WP_106020344.1 2688880..2691210(-) (comEC) [Bacillus halotolerans strain KKD1]
ATGCGGAATTCGCGTCTATTATTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTGCTGCCGCCTCTTATTTCTCCGC
TGTCTTTCTCTTCTTCCTCTCTCTTCTTATTGTGTCAACCAAAACAAGGCACGCTCCACTCATTTTTGTTTGTTTATTCT
CTTTTGTACTCAATTTTGCCCTGTTTAAGATCACAGATTCTCAAAATACTTCTTCGTATCAGCAGGGGAGCTATCACTTC
AAGGCGGTTATTCATAGTATTCCTAAAATTGAAGGGGATCGGATGTCTATGCTGATCAAGACGCCCGATGGCGAAAAATG
GGCTGCCTCTTATCGGATTCAGTCTTTAGCTGAAAAAGACAAACTGTCACATCTAGAGCCGGGTATGGCATGCGAATTGA
CTGGTGCTTTGGAGAAGCCAAAACAAGCAACAGTGCCGGGAACATTTGATTATCAACAGTATCTTTACCGGCAGCATATT
CATTGGAGCTATTCTGTCACATCTATTGGAAATTGCAGCGAGCCTTCAGGTGTCCGGTATAAGCTTCTCAGTTTGAGAAA
ATACATCGTATCATTCACGAACACACAGCTTCCGCCAGATTCAGCAGGAATCGTACAGGCGCTTACAGTAGGTGAAAGAT
CTTATTTAGATGACGATGTGCTTAATGCTTACCAAAGTCTAGGTGTTGTCCATCTGTTAGCCATCTCAGGACTCCATATC
GGAATTTTGACAGCAGGCCTATTTTACGCAATGATCCGTCTGGGCATAACAAGAGAAAATGCGTCAATCCTCTTGCTTTT
GTTTCTGCCGATCTATGTTATTTTGACAGGTGCAGCGCCCTCTGTTCTCCGAGCTGCTCTGATGTCGGGCATCTACTTAG
CGGGAAGCCTTTTTCAGCAGCGGGTGAATTCTGCCGGGGTAATCTGTCTTTCGTATATTGTCCTCTTGCTTTTTAATCCC
TACTACCTTTTTGAAGCTGGATTTCAGCTTTCATTTGCGGTCAGTTTTTCTTTAATTCTCTCATCGTCTATTTTTCAGCA
TATCAAAACGAGTCTGGGACAGCTGACGATTGTATCTGTTATTGCCCAGCTAGGCTCACTACCCATTCTTCTGTATCATT
TTCAGCAGTTTCCTATCATTAGCATTCCGATGAATATGGTGTTGGTGCCTTTTTATACATTCTGTATTTTACCGGCTGCT
ATTATAGGAGTTATTCTATTATTTTTTTCAGCATCCGTCGGTCAATTTCTGTTCTATTGGTTTGATGTAATGATGACCTG
GATCAACAGACTGATCACTAAAATCGCTGATATAGAAATATTCACAATCATCATCTCTCGCCCTGCACCTGCTCTTCTTC
TCTTATTCACGCTCACTGTCATCATATTGCTTATGAGTATTGAGAAACCCTCATTTCCCCGGCTGACAGTGTCCACAGGC
CTTTTTTGTGCAACGCTTATCCTGCTCTTTGTTTTTCCTTATGTTAGTTCCGAGGGAGAAGTAGATATGATTGATATCGG
ACAAGGTGACAGTATGTTTGTCAGTGCACCGTATCAGAAAGGCCGTGTTTTAATTGATACGGGAGGCACTTTGTCTTATT
CGTCAGAGCCTTGGCGGGAAAAACAGCATCCTTTTTCACTGGGGGAAAAGGTGCTGATCCCTTTTTTAACGGCAAAGGGC
ATCAAGCAGCTTGATGCGCTGATACTGACGCACGCAGATCAAGACCATATCGGAGAGGCAGAGGTTTTGCTGAAGCATCA
TAAAGTGAAGCGTCTCATCATTCCGAAAGGGTTTGTTTCCGAACCTCATGATGAGAAAGTGCTGCGGACTGCCAGACAGG
AGGGTGTGGCAATTGAAGAGGTGAAGCGGGGTGATGTATTGCAAATAAAGGACTTACAGTTTCATGTGCTGTCACCGGAA
ACGCCTGATCCGGCAAGTAAAAATAATTCTTCTCTCGTTCTATGGATGAAAACAGGCAGGATCAGCTGGCTCCTGACGGG
TGATCTGGAAAAAGAGGGGGAACAGGAGGTTATCGATGTGTTCCCAAATATAAAAGCGGATGTGTTAAAGGTGGGGCATC
ATGGAAGCAAGGGCTCGACCGGTGAAGAATTCATCAAACAGCTTCAGCCCAAAACGGCGGTCATCTCAGCGGGTGAAAAC
AATAGGTACCATCATCCGCATCAAGAAGTTCTTCAATTGTTAAAGAGCCGATTCATCCGTGTGCTGCGCACTGATCAAAG
CGGCACGATCCAATACACGTACAAAAGCGGATCTGGAACCTTTTCTGTTTATCCTCCATATGATACATCAGATATGACAG
AGACGAATTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (25-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	79.253	100	0.793