Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   I6H74_RS03715 Genome accession   NZ_CP066069
Coordinates   739194..740228 (+) Length   344 a.a.
NCBI ID   WP_015017341.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 734194..745228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS03685 (I6H74_03680) tsaE 735254..735697 (+) 444 WP_014612541.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6H74_RS03690 (I6H74_03685) - 735690..736211 (+) 522 WP_046176854.1 GNAT family N-acetyltransferase -
  I6H74_RS03695 (I6H74_03690) - 736223..737491 (+) 1269 WP_041789135.1 LCP family protein -
  I6H74_RS03700 (I6H74_03695) - 737649..737978 (-) 330 WP_003057072.1 hypothetical protein -
  I6H74_RS03705 (I6H74_03700) - 737975..738394 (-) 420 WP_012767493.1 HIT family protein -
  I6H74_RS03710 (I6H74_03705) pptA 738466..739191 (+) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  I6H74_RS03715 (I6H74_03710) pptB 739194..740228 (+) 1035 WP_015017341.1 ABC transporter permease Regulator
  I6H74_RS03720 (I6H74_03715) - 740293..741084 (+) 792 WP_003052472.1 phosphotransferase family protein -
  I6H74_RS03725 (I6H74_03720) trmB 741084..741719 (+) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6H74_RS03735 (I6H74_03730) rimP 742202..742696 (+) 495 WP_044022604.1 ribosome maturation factor RimP -
  I6H74_RS03740 (I6H74_03735) nusA 742839..743996 (+) 1158 WP_041789227.1 transcription termination factor NusA -
  I6H74_RS03745 (I6H74_03740) - 744012..744308 (+) 297 WP_003062190.1 YlxR family protein -
  I6H74_RS03750 (I6H74_03745) - 744301..744603 (+) 303 WP_003052320.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40194.42 Da        Isoelectric Point: 10.2471

>NTDB_id=453545 I6H74_RS03715 WP_015017341.1 739194..740228(+) (pptB) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MKALFLKRRQDFQKQQSKYLRYVFNDHFVLVLMFLFGFCLVQYSQLLKHFPSNHWPIWLFLMVGMLLLLHLGSVATYLEE
PDHHFLLPKEEAVVAHIKQAERSALVIWGCLQTAILIFLYPIFNRLGFSLVTFALLLLGLLALKRLLLGYKVRHFLKKDG
LDWEKAIAFESNRKQAILKFYSLFTNVKGISTKVKKRSYLNPLLKLVKENSKHLWLTLYLKAFLRSSDYLGLFLRLLLLS
SLALLFISNAYLSVALALVFNYLILFQLLSLYHHYDYHYMTSLYPENHQGKRANLLTFLRGLSCLILVINLLLCHSLEKA
LILVAVMGVITLFYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=453545 I6H74_RS03715 WP_015017341.1 739194..740228(+) (pptB) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAGAGCAAATACCTGCGCTATGTCTTTAATGACCA
TTTTGTCTTGGTCCTGATGTTTTTGTTTGGTTTTTGCTTGGTGCAATACAGCCAGTTATTGAAGCATTTTCCTAGTAATC
ATTGGCCTATATGGCTCTTTCTCATGGTGGGGATGCTGTTATTGCTTCACTTGGGCTCGGTGGCAACTTATTTAGAAGAG
CCTGATCACCATTTTCTACTTCCGAAAGAAGAAGCTGTGGTTGCTCATATTAAACAAGCTGAACGCTCTGCCCTTGTAAT
TTGGGGCTGTTTACAGACAGCTATCCTCATCTTTTTATATCCGATCTTCAATCGCCTAGGCTTCTCCTTAGTTACTTTTG
CTCTTTTACTTTTGGGATTACTAGCTCTTAAACGACTCCTTTTGGGGTATAAAGTAAGACACTTTTTAAAGAAAGATGGA
CTGGATTGGGAAAAAGCCATTGCTTTTGAGAGTAATCGTAAACAGGCTATCTTAAAGTTTTATTCTCTTTTCACAAATGT
TAAGGGAATTTCCACAAAGGTTAAGAAAAGATCTTATTTAAATCCTCTTCTAAAATTGGTAAAAGAAAATAGTAAGCACC
TCTGGCTAACGCTCTATTTAAAAGCTTTTTTACGAAGTTCAGACTATTTAGGACTCTTTTTACGCTTATTATTATTGAGT
TCCCTAGCCTTGCTGTTTATTTCTAACGCTTACCTATCAGTGGCTTTAGCCTTGGTCTTTAATTATTTGATTCTTTTTCA
ATTGTTGTCTCTTTACCACCATTACGATTACCACTACATGACTAGTCTTTATCCAGAGAATCATCAAGGGAAGCGGGCGA
ATCTATTGACTTTTTTGAGAGGATTAAGTTGTCTGATATTAGTTATCAACCTCCTGCTCTGCCATTCTTTAGAAAAAGCC
CTTATTTTAGTAGCGGTCATGGGAGTCATTACGCTTTTCTACCTCCCTTATAAGTTGAAGAAGATAATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.802

100

0.468

  pptB Streptococcus salivarius strain HSISS4

46.512

100

0.465