Detailed information NTG0453535

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: FOC72_RS11430
• Genome accession: NZ_CP054570
• Coordinates: 2344259..2345626 (+)
• Length: 455 a.a.
• NCBI ID: WP_080557372.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain FDAARGOS_770
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2339259..2350626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC72_RS11405 (FOC72_11405)	amiA	2339500..2341473 (-)	1974	WP_002893950.1	peptide ABC transporter substrate-binding protein	Regulator
FOC72_RS11410 (FOC72_11410)	-	2341701..2342390 (+)	690	WP_002893948.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	-
FOC72_RS11415 (FOC72_11415)	-	2342608..2343051 (+)	444	WP_002893947.1	dUTP diphosphatase	-
FOC72_RS11420 (FOC72_11420)	-	2343053..2343568 (+)	516	WP_002893946.1	histidine phosphatase family protein	-
FOC72_RS11425 (FOC72_11425)	-	2343621..2344253 (+)	633	WP_002893945.1	methyltransferase domain-containing protein	-
FOC72_RS11430 (FOC72_11430)	radA	2344259..2345626 (+)	1368	WP_080557372.1	DNA repair protein RadA	Machinery gene
FOC72_RS11435 (FOC72_11435)	-	2345743..2346459 (+)	717	WP_002893943.1	TIGR00266 family protein	-
FOC72_RS11440 (FOC72_11440)	-	2346572..2347267 (+)	696	WP_002893942.1	TIGR00266 family protein	-
FOC72_RS11445 (FOC72_11445)	-	2347557..2348042 (+)	486	WP_002893940.1	GNAT family N-acetyltransferase	-
FOC72_RS11450 (FOC72_11450)	-	2348224..2348680 (+)	457	Protein_2230	beta-class carbonic anhydrase	-
FOC72_RS11455 (FOC72_11455)	-	2348793..2349651 (+)	859	Protein_2231	ABC transporter permease	-
FOC72_RS11460 (FOC72_11460)	-	2349648..2350391 (+)	744	Protein_2232	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 49770.13 Da
• Isoelectric Point: 5.7873

>NTDB_id=453535 FOC72_RS11430 WP_080557372.1 2344259..2345626(+) (radA) [Streptococcus sanguinis strain FDAARGOS_770]
MTIVKKKTTFVCQNCEYHSPKYLGRCPNCGSWSSFVEEVEAAEVKHARVSLTGEKTRPMKLAEVTSIDVNRTKTEMDEFN
RVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSHQGIVLYVSGEESAEQIKLRAERLGDIDSEFYLYAETNMQNIRTE
IEKIKPDFLIIDSIQTVVSPEISSVQGSVSQVREVTAELMQLAKTNNIATFIVGHMTKEGTLAGPRTLEHMVDTVLYFEG
ERQHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVVNPSEVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGN
AKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDLPTNPQECFIGEIGLTGE
IRRVNRIEQRINEAAKLGFTKVYAPKNSLNGLKVPDNIQVIGVTTIGEVLKKVFS

Nucleotide

• Length: 1368 bp

>NTDB_id=453535 FOC72_RS11430 WP_080557372.1 2344259..2345626(+) (radA) [Streptococcus sanguinis strain FDAARGOS_770]
ATCACCATCGTTAAGAAAAAAACGACCTTTGTCTGTCAAAATTGTGAATATCATTCGCCCAAGTACCTAGGCCGCTGTCC
TAACTGTGGCTCTTGGTCTTCTTTCGTTGAGGAAGTAGAGGCTGCAGAGGTCAAGCATGCCCGTGTTTCCTTGACAGGCG
AAAAGACCCGGCCCATGAAGCTGGCTGAGGTCACTTCGATTGATGTCAATCGGACCAAGACGGAAATGGACGAGTTCAAC
CGTGTGCTGGGTGGTGGCGTAGTGCCTGGTAGTCTGGTTCTGATTGGCGGGGATCCCGGTATCGGGAAATCCACCCTGCT
TCTGCAAGTATCCACCCAGCTTTCCCACCAGGGCATCGTCCTATATGTCAGTGGGGAGGAATCAGCTGAGCAGATTAAGT
TGCGGGCGGAGCGTCTCGGTGATATTGACAGTGAATTTTATCTTTACGCCGAGACCAATATGCAAAATATCCGCACAGAG
ATTGAGAAAATCAAGCCAGATTTTCTGATTATTGACTCTATACAGACGGTGGTGTCACCGGAAATTTCCAGTGTTCAAGG
TTCTGTTTCTCAGGTTCGAGAGGTAACGGCTGAGCTCATGCAGCTGGCCAAGACCAATAATATCGCAACCTTTATCGTTG
GTCACATGACCAAGGAAGGAACCTTAGCTGGTCCCCGAACACTAGAGCACATGGTGGACACCGTGCTTTATTTTGAGGGT
GAACGTCAGCATACTTTCCGTATCTTGAGAGCCGTCAAGAACCGCTTTGGCTCAACCAATGAGATTGGCATTTTTGAAAT
GCAGTCTGGTGGGCTAGTTGAGGTTGTCAATCCAAGTGAAGTCTTTCTAGAAGAGCGTCTGGATGGCGCGACAGGTTCGT
CTATTGTCGTGACCATGGAAGGGACGCGGCCGATTTTGGCAGAGGTGCAGGCTTTGGTGACACCAACCATGTTCGGCAAT
GCTAAGCGGACCACAACTGGACTGGACTTTAACCGAGCCAGCCTCATCATGGCGGTTCTGGAAAAACGGGCAGGGCTCCT
CCTGCAAAATCAAGACGCCTACCTCAAATCAGCCGGCGGCGTCAAGCTAGATGAGCCAGCCATTGATTTGGCGGTGGCGG
TAGCCATTGCTTCCAGCTACAAGGATTTACCTACCAATCCCCAAGAGTGCTTTATCGGTGAAATTGGCCTGACTGGCGAA
ATCCGACGGGTCAACCGCATCGAGCAGCGCATCAACGAAGCAGCAAAGCTGGGCTTCACCAAAGTCTACGCTCCTAAAAA
CTCTCTGAACGGCCTCAAAGTTCCAGACAATATCCAAGTCATCGGTGTGACGACGATTGGGGAAGTCTTAAAGAAAGTAT
TTTCTTGA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-37)

• AAA domain (AAA_25) (63-220)

• Subunit ChlI of Mg-chelatase (ChlI) (362-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus mitis NCTC 12261	90.949	99.56	0.905
radA	Streptococcus pneumoniae Rx1	90.728	99.56	0.903
radA	Streptococcus pneumoniae D39	90.728	99.56	0.903
radA	Streptococcus pneumoniae R6	90.728	99.56	0.903
radA	Streptococcus pneumoniae TIGR4	90.728	99.56	0.903
radA	Streptococcus mitis SK321	90.728	99.56	0.903
radA	Bacillus subtilis subsp. subtilis str. 168	62.252	99.56	0.62