Detailed information NTG0453344

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6H72_RS06430
• Genome accession: NZ_CP066055
• Coordinates: 1281889..1282986 (-)
• Length: 365 a.a.
• NCBI ID: WP_049481244.1
• Uniprot ID: -
• Organism: Streptococcus constellatus strain FDAARGOS_1015
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1276889..1287986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H72_RS06410 (I6H72_06410)	-	1277373..1278062 (+)	690	WP_198457707.1	triose-phosphate isomerase	-
I6H72_RS06415 (I6H72_06415)	galE	1278082..1279077 (+)	996	WP_198457708.1	UDP-glucose 4-epimerase GalE	-
I6H72_RS06420 (I6H72_06420)	trpS	1279159..1280184 (+)	1026	WP_198457709.1	tryptophan--tRNA ligase	-
I6H72_RS06425 (I6H72_06425)	guaB	1280323..1281804 (+)	1482	WP_198457710.1	IMP dehydrogenase	-
I6H72_RS06430 (I6H72_06430)	recF	1281889..1282986 (-)	1098	WP_049481244.1	DNA replication/repair protein RecF	Machinery gene
I6H72_RS06435 (I6H72_06435)	yaaA	1282989..1283369 (-)	381	WP_039677740.1	S4 domain-containing protein YaaA	-
I6H72_RS06440 (I6H72_06440)	yfmF	1283544..1284791 (+)	1248	WP_332836264.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6H72_RS06445 (I6H72_06445)	yfmH	1284791..1286086 (+)	1296	WP_198457712.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6H72_RS06450 (I6H72_06450)	rodZ	1286145..1286966 (+)	822	WP_198457713.1	cytoskeleton protein RodZ	-
I6H72_RS06455 (I6H72_06455)	pgsA	1286977..1287516 (+)	540	WP_049481250.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42264.76 Da
• Isoelectric Point: 9.2965

>NTDB_id=453344 I6H72_RS06430 WP_049481244.1 1281889..1282986(-) (recF) [Streptococcus constellatus strain FDAARGOS_1015]
MWLKNLQIQHFRNYELTEIDFHPGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKVSGQLVKQTGK
ISLEIDLTPKGRITKVNHLKQSKLSDYIGNMNIVLFAPEDLQLIKGAPALRRKFVDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTIDETFLTVLDDQLVEFGCRIMQHRIEFLKKLEYFGQQKHLELSNNLENLTIKYCSSIRLSDFNKLEEAFRI
ALKQSRSRDLFKKTTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNNRQ
LNLLESISQNIQTFITTTTLEHLQNMPSDIKIFSIHEGNLTKKNM

Nucleotide

• Length: 1098 bp

>NTDB_id=453344 I6H72_RS06430 WP_049481244.1 1281889..1282986(-) (recF) [Streptococcus constellatus strain FDAARGOS_1015]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGCAATTACGAGCTAACTGAAATAGACTTTCATCCTGGACTCAACAT
TTTTCTAGGTCAAAATGCTCAAGGAAAAACAAATATTTTAGAAGCTATCTATTTTCTTGCATTGACACGGAGTCATCGAA
CTCGTTCAGATAAAGATTTAATTTATTTTTCTAAAGACACCTTAAAAGTATCTGGACAACTTGTCAAGCAAACTGGAAAG
ATCTCTTTAGAGATTGACTTGACACCAAAAGGAAGAATTACAAAGGTTAATCATCTAAAACAAAGCAAATTATCAGATTA
CATTGGAAATATGAATATTGTTTTGTTTGCTCCAGAAGATTTACAATTGATTAAAGGAGCTCCAGCCCTTAGACGCAAAT
TTGTTGATATAGAGTTGGGGCAAATTAAACCAATTTATTTATCTGATTTATCACATTATCATCATGTTCTAAAACAGAGA
AATACTTATTTAAAGACAGCAAAAACAATAGATGAGACTTTTTTAACTGTCTTGGATGATCAGTTAGTAGAGTTTGGTTG
CCGCATTATGCAGCATCGAATAGAATTTCTCAAAAAATTAGAATACTTTGGTCAGCAAAAACATTTGGAACTCTCAAATA
ATTTAGAAAATTTAACTATTAAATACTGCTCTTCTATTCGACTTTCAGATTTCAATAAACTAGAAGAAGCTTTTCGAATT
GCATTAAAACAAAGTCGTAGCAGAGATTTATTTAAAAAAACTACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGATATGAATGCTAATTTTGGTAGTCAAGGACAACATCGAAGCGTAGTCTTATCTCTCAAACTGGCAGAAATTG
AGCTTATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTCATGAGTGAACTTGACAATAACCGTCAA
CTTAATCTACTTGAATCTATTTCCCAAAACATCCAAACATTTATCACCACAACAACTCTAGAACATTTACAAAACATGCC
TTCTGATATTAAAATTTTCTCAATTCACGAAGGAAATTTAACAAAAAAAAACATGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	71.229	98.082	0.699
recF	Bacillus subtilis subsp. subtilis str. 168	44.324	100	0.449