Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | BAXH7_RS12240 | Genome accession | NC_017191 |
| Coordinates | 2427476..2427742 (-) | Length | 88 a.a. |
| NCBI ID | WP_044051905.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens XH7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2422476..2432742
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAXH7_RS12190 (BAXH7_02581) | sinR | 2422642..2422977 (+) | 336 | WP_014470659.1 | transcriptional regulator SinR | Regulator |
| BAXH7_RS12195 (BAXH7_02582) | tasA | 2423025..2423810 (-) | 786 | WP_013352862.1 | biofilm matrix protein TasA | - |
| BAXH7_RS12200 (BAXH7_02583) | sipW | 2423875..2424459 (-) | 585 | WP_013352863.1 | signal peptidase I SipW | - |
| BAXH7_RS12205 (BAXH7_02584) | tapA | 2424431..2425102 (-) | 672 | WP_013352864.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BAXH7_RS12210 (BAXH7_02585) | - | 2425360..2425689 (+) | 330 | WP_013352865.1 | DUF3889 domain-containing protein | - |
| BAXH7_RS12215 (BAXH7_02586) | - | 2425730..2425909 (-) | 180 | WP_013352866.1 | YqzE family protein | - |
| BAXH7_RS12220 (BAXH7_02587) | comGG | 2425963..2426340 (-) | 378 | WP_013352867.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BAXH7_RS12225 (BAXH7_02588) | comGF | 2426342..2426842 (-) | 501 | WP_013352868.1 | competence type IV pilus minor pilin ComGF | - |
| BAXH7_RS12230 (BAXH7_02589) | comGE | 2426751..2427065 (-) | 315 | WP_014470662.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BAXH7_RS12235 (BAXH7_02590) | comGD | 2427049..2427486 (-) | 438 | WP_013352869.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BAXH7_RS12240 (BAXH7_02591) | comGC | 2427476..2427742 (-) | 267 | WP_044051905.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BAXH7_RS12245 (BAXH7_02592) | comGB | 2427789..2428826 (-) | 1038 | WP_013352871.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BAXH7_RS12250 (BAXH7_02593) | comGA | 2428813..2429883 (-) | 1071 | WP_013352872.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BAXH7_RS12255 (BAXH7_02595) | - | 2430077..2431027 (-) | 951 | WP_013352873.1 | magnesium transporter CorA family protein | - |
| BAXH7_RS12260 (BAXH7_02596) | - | 2431174..2432475 (+) | 1302 | WP_013352874.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9749.41 Da Isoelectric Point: 6.7057
>NTDB_id=45333 BAXH7_RS12240 WP_044051905.1 2427476..2427742(-) (comGC) [Bacillus amyloliquefaciens XH7]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMTDLQSEGYIKKNTACPNGKQILIK
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMTDLQSEGYIKKNTACPNGKQILIK
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=45333 BAXH7_RS12240 WP_044051905.1 2427476..2427742(-) (comGC) [Bacillus amyloliquefaciens XH7]
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACGATTCCTAACGTAACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTTCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGAAAAATGC
CGGATATGACCGACTTACAATCAGAGGGATATATCAAAAAGAATACAGCCTGCCCGAATGGAAAACAGATTTTAATAAAG
GGCGGGGAAGTTACAGTTGAACAATAA
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACGATTCCTAACGTAACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTTCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGAAAAATGC
CGGATATGACCGACTTACAATCAGAGGGATATATCAAAAAGAATACAGCCTGCCCGAATGGAAAACAGATTTTAATAAAG
GGCGGGGAAGTTACAGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
74.648 |
80.682 |
0.602 |